G34470



Basic Information


Item Value
gene id G34470
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14889692 ~ 14893295 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU39113
CATAACATTAAGGTTGAACCACTGTAGTCACATGAACTGTTTTAAATATGTCTTTAGTAGCTTTCTGGGCATTTCTGGCCTCACTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTATTCTGAAGATAAACGAAGGTCTTACGGGTGTGGAACGGCATGAGGGTGAGTAATAAATTACATCATTTTCATTTTGGGGTGAACTAATCTTTTAACCACCATAAATCCACTCAAAAGTTATGAGTCAGACAATGATTCAGTATTGAATGGCTAAGACTTTTAAATGGGACTGTTTTATACTGGATGTTTGAGATAAATATTGTTTTCTGAGATAAATATTATAAGCACATACATTTCTGGGACTGCAAAATTTACCGTTGTGTCTTCAGAACTCACCTCTGTCCAGCAGTTATGAAATGGATCATAAGCTTCAACACTGTTCAATCTCTGCGTTCCATCAAAGCCACCCAAAACATACACCTTTCCTCCAACAACTGCCATCTTGTGTCTCCAGCGTCCTGTGCTGAGGAACTCTATCTGGATCCATTTGTTCAGCGATGCATTATACTTCCACACATCATGCAGTGTTTCCTTGCCACCTGTTTTAAGTTTACAATAATTAATGTTTTATAAATTTTCTTGCACATCAGCTTCCATGCTAATAAGCAAACTACTTTATCACATAGCCTATACTGATGCTCACCCGATATATAGACTTCATTTCTGAAAGTGACACACGCAAACTCCACCCACTTCTTATTTTCATTCTCAGACTCCATCTCCGTGTTTGGTAGTTTTGCGACCTCTAAGCGGCTCCTGCGTAGTGGGTCCAGACAGGTCACTTCAGATACAAACTTCTCTTCCTTTGTGCATCCTCCGATGATCATAAACACCTCAGACTGGAACTCCCGCACTCTTGGTTTGGTGCGCTCTGAGATCACCTATAAACCAAGAGGATTTAACACAGGATGATAATATTAATATAAAGCGACGAGAATATTTTTGGTGCGCCAAAAACAACAAAATAACGACTTATATAGTGATGGCCGATTTCAAAACACTGCTTCAGGAAGCTTCGGAGCGTTATGAATCTTTTGTGTCGAATCATCGGTTCGGAGCTCCAAAGTCACGTGATTTCAGCAGTTTGACACGCGATCCGAATCATGATTCGACACAAAAGATTCATAACGCTCCGAAGCTTCCTGAAGCAGTGTTTTGAAATCGGCCATCACTATATAAGTCGTTATTTTGTTTTTTTGCCGCACCAAAAATATTCTCGTCGCTTTATAATATTAATATTGTACTCACATGAACTGATTTAAATATGTTTTTAGTACATTAATGGATCTTGAGAGAGGAAATGTCATTGTTTAATGTAATTCTGTGTTAAATGAAGTGTTAAATGTCCAAATATTTCAGTTATGAATAAAATTAATGATGTTCGATTATTCACTTAGGCTATTATTATATTTTTATTTATTAATTAACAGTTAATCCAGTGTTATGTTCAATTTGTGCACTAATTTGTTTTCTTATGCATGATATGAAGGGGGTGGATTCTGGAATCCACTGCCGCTTCAATATATATCTTTTAAGTTATACAACATGTATCTTTCTAAATGTTAAATTATTTGAATGACTTCTTCAACGTATGTTAAAGCATTTATTTTCCTTGTCATCTTCACTAGAGAATAATGATGAGTATTGTGTGTTTCTCTCACTGAGAGAAAAGTACAACTTATCTGTATGTTTTGGGAATCTTTCCTGTTATAGTTGAAGCCTGGGCCGACTTCAGCCTTGAAGAAGTTGCGAATCATGTGTATCTTTGTATGTGCGCTAAGTGTTCTGTGCAGGTCCTGTTTTGGTACTGATGACAACTGGCACTCTGCTTGAGACCTGCAGATGCCTTTTCACGACTTAACAGGTCATCCTGTGCTTAAGTTCAGGGACCGATTGTCAGCATCGTGATGGATGGGGATATGCTTCTGACTATCTGTCCATGTGTGGAAGATTACTAATTTTGTCTATTTTTCTTAGCCAATCAGAATCATTCAACCTGAAGTAATGACATAGTTAGTGGACTCTGTTAGAGTATAATTGCTGTGTAAATGTGAATGTACGCGAGCGGCCTACGAACTCCTTTTGAGACTTGAAGCTGGCTTCTGCTGATGAAACGGCAAACTATTCTTCAGTAAAATTTTCTTCAATTTATTATATTTTTAAACTCTGACTCTGGGTCTTCATTCATCATATCTGGTCTTTTGGGTCTTTAACTGTAAAATTCCCCAACATTATATAGTAAGCTATATGTATTTTAAATTAATATCATTCGTATATACTTATACGTAGTAGTTTGTGGAGACCCGATTTCTAGGAAAATTTTTTTGAGTGTACCTTTGTTATTGAGAATAAGTCATATTTTACAAGTGTTTTCAGTCTAAAATGACCAAAACATAAATATGCCCAAATTGATTGAAGTCAGAATCAAATCAAGAGCTTGGTAATCAAATCAAATTGGGAAGTTTGCCCTAATATTCCTAATCTTCAAGGACAAAACCCACTTATGAAATGCACTTCCTCCAAAAAGCCTTGCCATGTCATTGTGACGCACTGTTATAATTCCAAAACTTGGATTTCACTTCCTATTTGAATGAACTTCCTATTTGAATGATCTTGTGATCACTTCAGCATTCATAAGAAAGGTCACCTTTGAAAAACTGACCTCTTTCCCTGAGAGGTGATAAACCCGGGCCTCCTGCAGCAGTGGGAACACCTCGGCACACTGGCGGATCAGCGGGTCTCCTTCCACCCTTTCTACAAAGTACCACGGGTCCAACAAGGGCAGTCGTACGTGTGCGAGAACACGCGGCAGCAGAGCCAGCCTTTCATCCTCTCGAGCCCTGACCCAACGTATAACCACGTCAAACACCTGTTCCTCCTCCGTTACCCCCAACTCATCATGCTGAAGCAGACTGACCAGCACATCGACAGGAAGCTCCAGGATCTCATCATGCTCCACTACTTGAGAGAAGTTTTGGATAATGTAGGTGTGGACTTGGACTTTCAAAGACTCCAACGAGTGGACGTCAGCTAGATGAAGGATGCCCACACAGTTTTCCGGGTATAGGGCTTCGGCTAAGTAACTGGCACAGGCGTCCACTATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU39113 True 3166 lncRNA 0.52 2 14889692 14893295

Neighbor


gene id symbol gene type direction distance location
CI01000004_14860344_14863053 NA coding downstream 26244 14860286 ~ 14863448 (-)
CI01000004_14846825_14850092 NA coding downstream 38161 14846785 ~ 14851531 (-)
CI01000004_14843132_14843640 NA coding downstream 45713 14842913 ~ 14843979 (-)
CI01000004_14832429_14839825 NA coding downstream 49673 14832151 ~ 14840019 (-)
CI01000004_14827536_14831360 NA coding downstream 58166 14827496 ~ 14831526 (-)
CI01000004_14897662_14906408 NA coding upstream 3955 14897250 ~ 14906426 (-)
CI01000004_14951433_14957539 NA coding upstream 57881 14951176 ~ 14957841 (-)
CI01000004_14999971_15002640 SLITRK3B coding upstream 105980 14999275 ~ 15002640 (-)
CI01000004_15063428_15066310 NA coding upstream 170133 15063428 ~ 15066310 (-)
CI01000004_15068206_15086386 MAP1SB coding upstream 174460 15067755 ~ 15086519 (-)
G34468 NA non-coding downstream 1636 14885825 ~ 14888056 (-)
G34474 NA non-coding downstream 51370 14837689 ~ 14838322 (-)
CI01000004_14815294_14818132 NA non-coding downstream 71536 14815142 ~ 14821516 (-)
G34478 NA non-coding downstream 83186 14806001 ~ 14806506 (-)
CI01000004_14775109_14792782 NA non-coding downstream 115051 14774282 ~ 14792784 (-)
G34550 NA non-coding upstream 16786 14910081 ~ 14912736 (-)
G34558 NA non-coding upstream 27773 14921068 ~ 14921339 (-)
G34635 NA non-coding upstream 87047 14980342 ~ 14995039 (-)
G34661 NA non-coding upstream 137150 15030445 ~ 15030741 (-)
G34663 NA non-coding upstream 138696 15031991 ~ 15032373 (-)
CI01000004_14808034_14808645 NA other downstream 81163 14807938 ~ 14808969 (-)
CI01000004_14749034_14751685 NA other downstream 137973 14748304 ~ 14753596 (-)
G34632 NA other upstream 118066 15011361 ~ 15025221 (-)
G34668 NA other upstream 157881 15051176 ~ 15052775 (-)
CI01000004_15086759_15087492 NA other upstream 193376 15086671 ~ 15087575 (-)
G34718 NA other upstream 387721 15281016 ~ 15281649 (-)
G34633 NA other upstream 894091 15787386 ~ 15787897 (-)

Expression



Co-expression Network