G34009


Basic Information

Item Value
gene id G34009
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15045242 ~ 15045445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38549
CAGGTTCTTTTGCCACTCAGTCCAGCTGAGGCAGTGTGTTCCGGCGGGAAAGTGACGTCAAAGCATACCCTCTATTCTGAGGAAAAATGTCACCTCACAATTCTGACATTTTCTTACAATTGCGAGTTCATACCACAAAATTCTGAGGGGAAAAAAAAATTGTCCGATAAAAAGTCTTTCATACCTACTCGCTCCGCGTCGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38549 True 204 lncRNA 0.50 1 15045242 15045445

Neighbor

gene id symbol gene type direction distance location
CI01000004_15010164_15028433 NRD1A, NRDC coding upstream 16534 15010164 ~ 15028708 (+)
CI01000004_14934532_14938094 NA coding upstream 107148 14933874 ~ 14938094 (+)
CI01000004_14919607_14929407 GOLIM4B coding upstream 115835 14919475 ~ 14929407 (+)
CI01000004_14910312_14915166 NA coding upstream 129263 14910114 ~ 14915979 (+)
CI01000004_14889786_14894594 KLHL6 coding upstream 150320 14889786 ~ 14894922 (+)
CI01000004_15048166_15051524 NA coding downstream 2721 15048166 ~ 15052817 (+)
CI01000004_15056504_15062261 RABGAP1L2 coding downstream 10477 15055922 ~ 15063180 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB coding downstream 45755 15091200 ~ 15097173 (+)
CI01000004_15110181_15110483 NA coding downstream 64153 15109598 ~ 15110625 (+)
CI01000004_15126731_15131774 NA coding downstream 81239 15126684 ~ 15132238 (+)
G34004 NA non-coding upstream 9009 15036017 ~ 15036233 (+)
G33951 NA non-coding upstream 191800 14845345 ~ 14853442 (+)
G33924 NA non-coding upstream 236953 14768014 ~ 14808289 (+)
G33919 NA non-coding upstream 253127 14758132 ~ 14792115 (+)
G33662 NA non-coding upstream 509898 14535078 ~ 14535344 (+)
G34017 NA non-coding downstream 48660 15094105 ~ 15094375 (+)
G34027 NA non-coding downstream 57905 15103350 ~ 15103577 (+)
G34028 NA non-coding downstream 58521 15103966 ~ 15104168 (+)
G34031 NA non-coding downstream 60977 15106422 ~ 15106699 (+)
G34032 NA non-coding downstream 61291 15106736 ~ 15160060 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1008342 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2389531 12646838 ~ 12652570 (+)
G31865 NA other upstream 2850095 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3377583 11666900 ~ 11667659 (+)
G31710 NA other upstream 3402842 11637251 ~ 11642400 (+)
G34220 NA other downstream 893912 15939357 ~ 15939950 (+)
G33815 NA other downstream 1017970 16063415 ~ 16066464 (+)
G34400 NA other downstream 1931883 16971995 ~ 17025976 (+)

Expression


Co-expression Network