G34017


Basic Information

Item Value
gene id G34017
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15094105 ~ 15094375 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38559
AATGGCGCAAATACCAGTAAATTGACTAGCTGAAACATTAGTAAATCACCTTGCATGATTAATTTAAATACTCTCCTCCCATAAATTTTGCATCTGAAAGGGAAACTCCTACAAATGCATATGCAATAAGGTCAGCCGCAAAAATAATTGTGTCTATGCCTTTCAGCACTAATTTTTCACTGCGTGTCTTTAGTAAATCCTGACAGTAGTTTTTTTTGGCGCAAGCTGTTAGTAAATAAAGGGACCTATTAGGTGTTTAAACATAAATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38559 True 271 lncRNA 0.35 1 15094105 15094375

Neighbor

gene id symbol gene type direction distance location
CI01000004_15056504_15062261 RABGAP1L2 coding upstream 30925 15055922 ~ 15063180 (+)
CI01000004_15048166_15051524 NA coding upstream 41288 15048166 ~ 15052817 (+)
CI01000004_15010164_15028433 NRD1A, NRDC coding upstream 65397 15010164 ~ 15028708 (+)
CI01000004_14934532_14938094 NA coding upstream 156011 14933874 ~ 14938094 (+)
CI01000004_14919607_14929407 GOLIM4B coding upstream 164698 14919475 ~ 14929407 (+)
CI01000004_15110181_15110483 NA coding downstream 15223 15109598 ~ 15110625 (+)
CI01000004_15126731_15131774 NA coding downstream 32309 15126684 ~ 15132238 (+)
CI01000004_15200553_15209521 SLC1A8B coding downstream 103867 15198242 ~ 15209824 (+)
CI01000004_15229290_15233374 PEX19 coding downstream 134401 15228776 ~ 15234597 (+)
CI01000004_15237719_15253901 COPA coding downstream 143344 15237719 ~ 15254158 (+)
G34009 NA non-coding upstream 48660 15045242 ~ 15045445 (+)
G34004 NA non-coding upstream 57872 15036017 ~ 15036233 (+)
G33951 NA non-coding upstream 240663 14845345 ~ 14853442 (+)
G33924 NA non-coding upstream 285816 14768014 ~ 14808289 (+)
G33919 NA non-coding upstream 301990 14758132 ~ 14792115 (+)
G34027 NA non-coding downstream 8975 15103350 ~ 15103577 (+)
G34028 NA non-coding downstream 9591 15103966 ~ 15104168 (+)
G34031 NA non-coding downstream 12047 15106422 ~ 15106699 (+)
G34032 NA non-coding downstream 12361 15106736 ~ 15160060 (+)
G33896 NA non-coding downstream 129286 15223661 ~ 15223914 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 2136 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1057205 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2438394 12646838 ~ 12652570 (+)
G31865 NA other upstream 2898958 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3426446 11666900 ~ 11667659 (+)
G34220 NA other downstream 844982 15939357 ~ 15939950 (+)
G33815 NA other downstream 969040 16063415 ~ 16066464 (+)
G34400 NA other downstream 1882953 16971995 ~ 17025976 (+)

Expression


Co-expression Network