G34028


Basic Information

Item Value
gene id G34028
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15103966 ~ 15104168 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38570
GACCAAAACAAAAACAGAAGTTCCGACATGGAACGCACATTTCAAAGTAGAATAACTGGTTGTAACATTGTTTTTCATAGAAAAAGAGTATGTGAACTTAGGATTTTTCCTAAATATCTGCAAGCATATTATGGTATTTTTATGCTTTAATACAGTCAAAAAATGTACATGCAGCACCTTTGAGTAAGTGTCCTTAATTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38570 True 203 lncRNA 0.44 1 15103966 15104168

Neighbor

gene id symbol gene type direction distance location
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB coding upstream 6793 15091200 ~ 15097173 (+)
CI01000004_15056504_15062261 RABGAP1L2 coding upstream 40786 15055922 ~ 15063180 (+)
CI01000004_15048166_15051524 NA coding upstream 51149 15048166 ~ 15052817 (+)
CI01000004_15010164_15028433 NRD1A, NRDC coding upstream 75258 15010164 ~ 15028708 (+)
CI01000004_14934532_14938094 NA coding upstream 165872 14933874 ~ 14938094 (+)
CI01000004_15110181_15110483 NA coding downstream 5430 15109598 ~ 15110625 (+)
CI01000004_15126731_15131774 NA coding downstream 22516 15126684 ~ 15132238 (+)
CI01000004_15200553_15209521 SLC1A8B coding downstream 94074 15198242 ~ 15209824 (+)
CI01000004_15229290_15233374 PEX19 coding downstream 124608 15228776 ~ 15234597 (+)
CI01000004_15237719_15253901 COPA coding downstream 133551 15237719 ~ 15254158 (+)
G34027 NA non-coding upstream 389 15103350 ~ 15103577 (+)
G34017 NA non-coding upstream 9591 15094105 ~ 15094375 (+)
G34009 NA non-coding upstream 58521 15045242 ~ 15045445 (+)
G34004 NA non-coding upstream 67733 15036017 ~ 15036233 (+)
G33951 NA non-coding upstream 250524 14845345 ~ 14853442 (+)
G34031 NA non-coding downstream 2254 15106422 ~ 15106699 (+)
G34032 NA non-coding downstream 2568 15106736 ~ 15160060 (+)
G33896 NA non-coding downstream 119493 15223661 ~ 15223914 (+)
G34055 NA non-coding downstream 131962 15236130 ~ 15236383 (+)
G34061 NA non-coding downstream 167476 15271644 ~ 15271905 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1067066 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2448255 12646838 ~ 12652570 (+)
G31865 NA other upstream 2908819 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3436307 11666900 ~ 11667659 (+)
G34220 NA other downstream 835189 15939357 ~ 15939950 (+)
G33815 NA other downstream 959247 16063415 ~ 16066464 (+)
G34400 NA other downstream 1873160 16971995 ~ 17025976 (+)

Expression


Co-expression Network