G34055


Basic Information

Item Value
gene id G34055
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15236130 ~ 15236383 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38606
TTGATTTTTAGTTGTTTTAGCTTATTTTAATACTTGTTATGTAAATCATCTTGTGTCCCCCTTGGAAGTTTGCTGAGGCCCCCTGGTTGAGAACCACAGATTTAACATCTTTTGAATTAAGTCTTATCAGAACTATAAACTTTTTACATGTACAGGACCCTAGTTCATATCTTTCTTGATGGCATTTGTCATCCATAGATAATGTTAAAGGATTAGTTCACTTCAGAATTAAAATTTCCTGATAATTTACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38606 True 254 lncRNA 0.45 1 15236130 15236383

Neighbor

gene id symbol gene type direction distance location
CI01000004_15229290_15233374 PEX19 coding upstream 1533 15228776 ~ 15234597 (+)
CI01000004_15200553_15209521 SLC1A8B coding upstream 26306 15198242 ~ 15209824 (+)
CI01000004_15126731_15131774 NA coding upstream 103892 15126684 ~ 15132238 (+)
CI01000004_15110181_15110483 NA coding upstream 125505 15109598 ~ 15110625 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB coding upstream 138957 15091200 ~ 15097173 (+)
CI01000004_15237719_15253901 COPA coding downstream 1336 15237719 ~ 15254158 (+)
CI01000004_15260416_15262090 APODA.2 coding downstream 23856 15260239 ~ 15262240 (+)
CI01000004_15277204_15286845 SAMD7 coding downstream 40821 15277204 ~ 15286987 (+)
CI01000004_15291659_15296777 NA coding downstream 55276 15291659 ~ 15297847 (+)
CI01000004_15316323_15317231 NA coding downstream 79564 15315947 ~ 15317342 (+)
G33896 NA non-coding upstream 12216 15223661 ~ 15223914 (+)
G34032 NA non-coding upstream 76070 15106736 ~ 15160060 (+)
G34031 NA non-coding upstream 129431 15106422 ~ 15106699 (+)
G34028 NA non-coding upstream 131962 15103966 ~ 15104168 (+)
G34027 NA non-coding upstream 132553 15103350 ~ 15103577 (+)
G34061 NA non-coding downstream 35261 15271644 ~ 15271905 (+)
G33857 NA non-coding downstream 182878 15419261 ~ 15425806 (+)
G34090 NA non-coding downstream 196785 15433168 ~ 15433373 (+)
G34100 NA non-coding downstream 244880 15481263 ~ 15481530 (+)
G34101 NA non-coding downstream 245537 15481920 ~ 15482315 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1199230 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2580419 12646838 ~ 12652570 (+)
G31865 NA other upstream 3040983 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3568471 11666900 ~ 11667659 (+)
G34220 NA other downstream 702974 15939357 ~ 15939950 (+)
G33815 NA other downstream 827032 16063415 ~ 16066464 (+)
G34400 NA other downstream 1740945 16971995 ~ 17025976 (+)

Expression


Co-expression Network