XLOC_000708 (LO017722.1)


Basic Information

Item Value
gene id XLOC_000708
gene name LO017722.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 54124209 ~ 54126428 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001184
ATGGAGTGGCAGCCGGATGAACAGGGTTTACAGCAGGTTCTGCAGTTGTTGAAGGACTCCCAGTCTCCAGATACGGCCACGCAGAGAGCCGttcaagagAAACTGGAGCAGCTGAATCAGTTTCCCGACTTTAACAACTACCTGATCTTCGTACTCACCAGCCTCAAATCAGAAGATGAGCCCACCCGTTCTCTGAGCGGCCTGATCCTCAAGAATAATGTGAAGGCTCACTACCAGAACTTCCCTCCGGCTGTGGCTGACTTCATCAAGAGAGAGTGTCTCAACAACATCGGCGACCCGTCTCCTCTTATCCGCGCCACCATCGGTCAGTCTCAGGCCAGACTTTCTGTAGTGGCTTGCTTAATGAAGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113296

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001184 True 372 mRNA 0.52 3 54124209 54126428

Neighbor

gene id symbol gene type direction distance location
XLOC_000707 rln3b coding upstream 6157 54115839 ~ 54118052 (+)
XLOC_000706 dcaf15 coding upstream 39544 54069450 ~ 54084665 (+)
XLOC_000705 triobpa coding upstream 62097 54037077 ~ 54062112 (+)
XLOC_000704 dla coding upstream 97857 54013457 ~ 54026352 (+)
XLOC_000703 NA coding upstream 135433 53982614 ~ 53988776 (+)
XLOC_000709 TNPO2 coding downstream 10661 54137089 ~ 54146461 (+)
XLOC_000710 CABZ01067150.1 coding downstream 59611 54186039 ~ 54186156 (+)
XLOC_000711 CABZ01067150.2 coding downstream 68373 54194801 ~ 54274861 (+)
XLOC_000712 NA coding downstream 150815 54277243 ~ 54469289 (+)
XLOC_000713 NA coding downstream 275505 54401933 ~ 54404147 (+)
XLOC_000699 NA non-coding upstream 258372 53864528 ~ 53865837 (+)
XLOC_000697 NA non-coding upstream 353470 53760797 ~ 53770739 (+)
XLOC_000695 NA non-coding upstream 428654 53688977 ~ 53695555 (+)
XLOC_000694 NA non-coding upstream 465920 53656231 ~ 53658289 (+)
XLOC_000715 NA non-coding downstream 485410 54611838 ~ 54613479 (+)
XLOC_000721 NA non-coding downstream 571745 54698173 ~ 54700755 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01020283_00000807_00001177 NA coding CI01020283 null 807 ~ 1177 (+)