G34100


Basic Information

Item Value
gene id G34100
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15481263 ~ 15481530 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38659
CTCTCACAGTTTCGGCAAATGTAGCCTTTATACTGTCCAATTTTGTTGTGTATTTTAGGCTATGCTAGAGAACCTGCTGATTCATAACTAATTCTGTCATTTAACATTGATGTGATCAATTTATTACAGTTACAGGTCAGGAGGCTGGTGTTCAGTTGTGATTTCCCCTGTTGCTCATTTATAGTTGGTCAAACTGCTACTGCTACAACACCTTGAATTTTTCTTTGTTTTCTTCACACATCACGTATCATATTTCATCTAATGCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38659 True 268 lncRNA 0.39 1 15481263 15481530

Neighbor

gene id symbol gene type direction distance location
CI01000004_15444403_15453408 SPPL2, SPPL2B coding upstream 27086 15444403 ~ 15454177 (+)
CI01000004_15400244_15414139 NA coding upstream 66887 15400244 ~ 15414376 (+)
CI01000004_15325044_15326740 NA coding upstream 154476 15325044 ~ 15326787 (+)
CI01000004_15316323_15317231 NA coding upstream 163921 15315947 ~ 15317342 (+)
CI01000004_15291659_15296777 NA coding upstream 183416 15291659 ~ 15297847 (+)
CI01000004_15631508_15632389 NA coding downstream 149900 15631430 ~ 15632403 (+)
CI01000004_15645965_15650241 NA coding downstream 164435 15645965 ~ 15650274 (+)
CI01000004_15687242_15691238 NA coding downstream 203732 15685262 ~ 15691277 (+)
CI01000004_15694735_15698103 SDR39U1 coding downstream 213205 15694735 ~ 15698421 (+)
CI01000004_15711867_15722470 PARP2 coding downstream 230337 15711867 ~ 15722582 (+)
G34090 NA non-coding upstream 47890 15433168 ~ 15433373 (+)
G33857 NA non-coding upstream 55457 15419261 ~ 15425806 (+)
G34061 NA non-coding upstream 209358 15271644 ~ 15271905 (+)
G34055 NA non-coding upstream 244880 15236130 ~ 15236383 (+)
G33896 NA non-coding upstream 257349 15223661 ~ 15223914 (+)
G34101 NA non-coding downstream 390 15481920 ~ 15482315 (+)
G34141 NA non-coding downstream 74325 15555855 ~ 15556213 (+)
G34142 NA non-coding downstream 74875 15556405 ~ 15556784 (+)
G33834 NA non-coding downstream 104536 15586066 ~ 15594375 (+)
G33882 NA non-coding downstream 138549 15620079 ~ 15622320 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 389294 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1444363 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 2825552 12646838 ~ 12652570 (+)
G31865 NA other upstream 3286116 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 3813604 11666900 ~ 11667659 (+)
G34220 NA other downstream 457827 15939357 ~ 15939950 (+)
G33815 NA other downstream 581885 16063415 ~ 16066464 (+)
G34400 NA other downstream 1495798 16971995 ~ 17025976 (+)

Expression


Co-expression Network