Gene
RNA
| Item | Value |
|---|---|
| gene id | G34188 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 15767752 ~ 15767991 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 646-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38750 | True | 240 | lncRNA | 0.30 | 1 | 15767752 | 15767991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_15711867_15722470 | PARP2 | coding | upstream | 45170 | 15711867 ~ 15722582 (+) |
| CI01000004_15694735_15698103 | SDR39U1 | coding | upstream | 69331 | 15694735 ~ 15698421 (+) |
| CI01000004_15687242_15691238 | NA | coding | upstream | 76475 | 15685262 ~ 15691277 (+) |
| CI01000004_15645965_15650241 | NA | coding | upstream | 117478 | 15645965 ~ 15650274 (+) |
| CI01000004_15631508_15632389 | NA | coding | upstream | 135349 | 15631430 ~ 15632403 (+) |
| CI01000004_15787382_15803133 | NA | coding | downstream | 19391 | 15787382 ~ 15803144 (+) |
| CI01000004_15825817_15827475 | TEP1 | coding | downstream | 57826 | 15825817 ~ 15827603 (+) |
| CI01000004_15859240_15861471 | APOL1 | coding | downstream | 91249 | 15859240 ~ 15863449 (+) |
| CI01000004_15867404_15875293 | NA | coding | downstream | 98994 | 15866985 ~ 15875304 (+) |
| CI01000004_15892502_15900203 | DCAF8 | coding | downstream | 122382 | 15890373 ~ 15900852 (+) |
| G34186 | NA | non-coding | upstream | 11361 | 15756035 ~ 15756391 (+) |
| G34183 | NA | non-coding | upstream | 15204 | 15751663 ~ 15752548 (+) |
| G34181 | NA | non-coding | upstream | 18826 | 15748649 ~ 15748926 (+) |
| G33803 | NA | non-coding | upstream | 56786 | 15622928 ~ 15710966 (+) |
| G33882 | NA | non-coding | upstream | 145432 | 15620079 ~ 15622320 (+) |
| G34192 | NA | non-coding | downstream | 8268 | 15776259 ~ 15776513 (+) |
| G34193 | NA | non-coding | downstream | 8799 | 15776790 ~ 15777008 (+) |
| G34194 | NA | non-coding | downstream | 9042 | 15777033 ~ 15777351 (+) |
| G34195 | NA | non-coding | downstream | 11175 | 15779166 ~ 15779498 (+) |
| G34196 | NA | non-coding | downstream | 11684 | 15779675 ~ 15780624 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | upstream | 675783 | 15091200 ~ 15097173 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | other | upstream | 1730852 | 14035393 ~ 14039142 (+) |
| CI01000004_12646972_12652534 | NA | other | upstream | 3112041 | 12646838 ~ 12652570 (+) |
| G31865 | NA | other | upstream | 3572605 | 12192130 ~ 12197418 (+) |
| CI01000004_11666900_11667179 | NA | other | upstream | 4100093 | 11666900 ~ 11667659 (+) |
| G34220 | NA | other | downstream | 171366 | 15939357 ~ 15939950 (+) |
| G33815 | NA | other | downstream | 295424 | 16063415 ~ 16066464 (+) |
| G34400 | NA | other | downstream | 1209337 | 16971995 ~ 17025976 (+) |
