G34195


Basic Information

Item Value
gene id G34195
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15779166 ~ 15779498 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38758
AACGACACGCCTCCAGACGCTCGGCTGTTTTCGGAAAGACTCGGTACAGCGTATGTATCTTTTATAAATATGATAAAACTAAAGACTTTTTGGAGATATGAAGGATGCACTACTACTCTATAGGTACTCAAGATTAACATGAGATTGGCAGAAACTGTGTGTGATACCCCCCTTTAATATAATCGGCAGAGTCCGCGCTACCTAGGCTTTCAAAGTAATTGATGCTAGCCATTTCCTCACTAACAGTCACAGGTCTCGTCTTGTAGGCTATCAAATTTCTTTCAAATGTAGCCTTGTCGTAAACATTTAGGATAGAAAGGCTCAACAACCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38758 True 333 lncRNA 0.26 1 15779166 15779498

Neighbor

gene id symbol gene type direction distance location
CI01000004_15711867_15722470 PARP2 coding upstream 56584 15711867 ~ 15722582 (+)
CI01000004_15694735_15698103 SDR39U1 coding upstream 80745 15694735 ~ 15698421 (+)
CI01000004_15687242_15691238 NA coding upstream 87889 15685262 ~ 15691277 (+)
CI01000004_15645965_15650241 NA coding upstream 128892 15645965 ~ 15650274 (+)
CI01000004_15631508_15632389 NA coding upstream 146763 15631430 ~ 15632403 (+)
CI01000004_15787382_15803133 NA coding downstream 7884 15787382 ~ 15803144 (+)
CI01000004_15825817_15827475 TEP1 coding downstream 46319 15825817 ~ 15827603 (+)
CI01000004_15859240_15861471 APOL1 coding downstream 79742 15859240 ~ 15863449 (+)
CI01000004_15867404_15875293 NA coding downstream 87487 15866985 ~ 15875304 (+)
CI01000004_15892502_15900203 DCAF8 coding downstream 110875 15890373 ~ 15900852 (+)
G34194 NA non-coding upstream 1815 15777033 ~ 15777351 (+)
G34193 NA non-coding upstream 2158 15776790 ~ 15777008 (+)
G34192 NA non-coding upstream 2653 15776259 ~ 15776513 (+)
G34188 NA non-coding upstream 11175 15767752 ~ 15767991 (+)
G34186 NA non-coding upstream 22775 15756035 ~ 15756391 (+)
G34196 NA non-coding downstream 177 15779675 ~ 15780624 (+)
G34205 NA non-coding downstream 63634 15843132 ~ 15843402 (+)
G34213 NA non-coding downstream 107780 15887278 ~ 15887534 (+)
G34214 NA non-coding downstream 141185 15920683 ~ 15920886 (+)
G34215 NA non-coding downstream 144206 15923704 ~ 15924496 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 687197 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1742266 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3123455 12646838 ~ 12652570 (+)
G31865 NA other upstream 3584019 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4111507 11666900 ~ 11667659 (+)
G34220 NA other downstream 159859 15939357 ~ 15939950 (+)
G33815 NA other downstream 283917 16063415 ~ 16066464 (+)
G34400 NA other downstream 1197830 16971995 ~ 17025976 (+)

Expression


Co-expression Network