G34641


Basic Information

Item Value
gene id G34641
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15801003 ~ 15809605 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU39326
TGAGCTCCTCACAGGCCAAATGGAGGTAGAGTGGACTTACAGAGCCTTTCTTCATCAGCAGTGTCTGAAGCTGGTTATTGAAAGCAGAATCGCTCAGTTTCTTTCCAAACCCAACAAGCTGCTTCTGCACAATCTCCTTCTTGTCAGGTAAGGATAATTGCCCCAGTGGAAATGACACAGCACCTTTCCTTTTGCTAATAGTGTTTTGTAGGGATGATTCTGAAGTAACACTCAGGACCAAACAGACACCCTTAGGGATGTGCTGTGGTATCCATTCTGACACCCTTTGACCTCGACCGTCATGGATACGGTCCGCCCCATCAACAAGCAAGGCCAGTGGCTTCTCTTTGTTCAGGTCCTTCAAGTTCAAGTGGAACTCAGACAACAAGTCTTTGTAAGATGTGTTTGAAGGCAACTCCACATCATCTTTTATTTTCCTCAGCCACTGAACAAGACAGCGAAGAAGCTGCTCAACACTGCAAGCTGATTGGCTAGCATCTGTGGAGTAGGATATGACATCACAAAGAGGCGCTTTCTTGTTTTTGACAGAGGTTTTGAGTGCCTGGGCCAGGGCAGCCATGAACACAGTTTTGCCCTCTCCAGGCTTTCCCTCAACCATCAGAATTCCTCCTTTTTGCTGACATTCTTGAAGTTTTTCTGTTGCAATAGAAATAAGCTTTGCCCTGCCGTGAAACTGCCGCTGTTGGGAATCCTGATGGACTTCCTGTTCTTTAATCTCTGAGGTCAAATCTTCATCTGTCTCCTCTACAAAGAGTTGCTGTACAGCTTCCCAGATATCCTCCAGTGCTGCCCGCCCGAAGTCCTCCAGGCCTTTCACATAGGGCTTTCCATCCACCACCCCACCCCATTCACAGGGATAATTTTCTGTCACTTTAAACTCGTTGTTGTGGATCCATGTTTTCAGGCTGTTCATTTTAGCTTCAGCTTCTTTGGATTCTGCCACAAAGTCTGTCCTCCATGCCACTGGCACTGAACTGGTGAGATGGGGCGATCTGAAGTAGAAGAACATGCGACTTTGGGAAGAGTCTGGATACAGCGCTTGAAACTGTCGAATCTCCATTTCAGTAATGGATAACCCATCAGGCGCAGAGTTCAGCCAGCTGTATTGAGGAAGTTCAGGTAGAGTAGGGCGGGGCGGCACCAAGCCATATCTCTCCCCCAGAATTCCCAGCAACAGCTGGCTGCGGCAAACCTCCGACAGACAGAGCTCCACAGCACGGTTAGACTCCTCCTCCGTAACGCCCCAGCGCAGCTCCACTTCCTGCAGGTAGAGATAGTGCGCCGCTGCCCGCCTTCTGAGCTCTGGAAACACACTACGCACAAGAACATCCCTCTCCGCATGCATGTCCCTGAACGTAGAAGAGATGAACACTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39326 True 1398 lncRNA 0.48 9 15801003 15809605

Neighbor

gene id symbol gene type direction distance location
CI01000004_15760841_15761919 HBL4 coding downstream 39016 15760790 ~ 15761987 (-)
CI01000004_15751774_15753519 NA coding downstream 45606 15751733 ~ 15755397 (-)
CI01000004_15726420_15733105 NA coding downstream 67898 15726052 ~ 15733105 (-)
CI01000004_15702447_15708692 METTL17 coding downstream 92311 15702371 ~ 15708692 (-)
CI01000004_15653837_15673610 NFATC4 coding downstream 127393 15653725 ~ 15673610 (-)
CI01000004_15827737_15828938 NA coding upstream 18063 15827668 ~ 15828960 (-)
CI01000004_15832789_15836192 NA coding upstream 22979 15832573 ~ 15836231 (-)
CI01000004_15836936_15841048 NA coding upstream 26857 15836462 ~ 15841829 (-)
CI01000004_15881212_15881809 NA coding upstream 71258 15880140 ~ 15883692 (-)
CI01000004_15911104_15915972 NA coding upstream 101331 15910936 ~ 15916019 (-)
G34779 NA non-coding downstream 4613 15796010 ~ 15796390 (-)
G34620 NA non-coding downstream 20389 15779676 ~ 15780614 (-)
G34778 NA non-coding downstream 28607 15772159 ~ 15772396 (-)
G34776 NA non-coding downstream 32733 15767309 ~ 15768270 (-)
G34608 NA non-coding downstream 35230 15763242 ~ 15765773 (-)
G34784 NA non-coding upstream 3424 15813029 ~ 15813907 (-)
G34785 NA non-coding upstream 7230 15816835 ~ 15817372 (-)
G34783 NA non-coding upstream 10144 15819749 ~ 15819958 (-)
G34786 NA non-coding upstream 13097 15822702 ~ 15823085 (-)
G34787 NA non-coding upstream 15206 15824811 ~ 15825101 (-)
G34633 NA other downstream 13106 15787386 ~ 15787897 (-)
G34718 NA other downstream 519354 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 710645 15086671 ~ 15087575 (-)
G34668 NA other downstream 748228 15051176 ~ 15052775 (-)
G34632 NA other downstream 775782 15011361 ~ 15025221 (-)
G34796 NA other upstream 51008 15860613 ~ 15863748 (-)
G34934 NA other upstream 592140 16401745 ~ 16421506 (-)
G34982 NA other upstream 693120 16502725 ~ 16515974 (-)
G34995 NA other upstream 719837 16529442 ~ 16533008 (-)

Expression


Co-expression Network