G34213


Basic Information

Item Value
gene id G34213
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15887278 ~ 15887534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38777
GTTTTACTTTAGCGCTCCTCCTCTCCATCTCTCGCTCATAGCAGACTAAAGGCAGGAATACAGCTAGCTGACATCGACAAACTAGTGGCGACAAAAGCAGACTGCGGGGTTGGCTCACGTCGGCAGCATCTGGGTCCAAAGTCAGAGATCGTATTATTATAGGGAGATAAGAGGGTCTGTATCTCTTACCATTGGAGAAAGCGTAACGGCTAACTTAATCACGTGCGGCACCTCTCAGCCTATTGTGTCGCCATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38777 True 257 lncRNA 0.33 1 15887278 15887534

Neighbor

gene id symbol gene type direction distance location
CI01000004_15867404_15875293 NA coding upstream 11974 15866985 ~ 15875304 (+)
CI01000004_15859240_15861471 APOL1 coding upstream 23829 15859240 ~ 15863449 (+)
CI01000004_15825817_15827475 TEP1 coding upstream 59675 15825817 ~ 15827603 (+)
CI01000004_15787382_15803133 NA coding upstream 84134 15787382 ~ 15803144 (+)
CI01000004_15711867_15722470 PARP2 coding upstream 164696 15711867 ~ 15722582 (+)
CI01000004_15892502_15900203 DCAF8 coding downstream 2839 15890373 ~ 15900852 (+)
CI01000004_15906907_15909647 HNRNPC coding downstream 19373 15906907 ~ 15909669 (+)
CI01000004_15930478_15944692 NA coding downstream 42944 15930478 ~ 15944744 (+)
CI01000004_15947153_15953245 NA coding downstream 59619 15947153 ~ 15953870 (+)
CI01000004_16008731_16013012 NA coding downstream 121081 16008615 ~ 16013049 (+)
G34205 NA non-coding upstream 43876 15843132 ~ 15843402 (+)
G34196 NA non-coding upstream 106654 15779675 ~ 15780624 (+)
G34195 NA non-coding upstream 107780 15779166 ~ 15779498 (+)
G34194 NA non-coding upstream 109927 15777033 ~ 15777351 (+)
G34193 NA non-coding upstream 110270 15776790 ~ 15777008 (+)
G34214 NA non-coding downstream 33149 15920683 ~ 15920886 (+)
G34215 NA non-coding downstream 36170 15923704 ~ 15924496 (+)
G34216 NA non-coding downstream 40967 15928501 ~ 15928750 (+)
G34228 NA non-coding downstream 127372 16014906 ~ 16015106 (+)
G34229 NA non-coding downstream 131729 16019263 ~ 16019489 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 795309 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1850378 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3231567 12646838 ~ 12652570 (+)
G31865 NA other upstream 3692131 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4219619 11666900 ~ 11667659 (+)
G34220 NA other downstream 51823 15939357 ~ 15939950 (+)
G33815 NA other downstream 175881 16063415 ~ 16066464 (+)
G34400 NA other downstream 1089794 16971995 ~ 17025976 (+)

Expression


Co-expression Network