G34220


Basic Information

Item Value
gene id G34220
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15939357 ~ 15939950 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38784
TGATGGCTTGACGACTGGGTCAGAGCATCTCCAGAACTGCAGCTCTTGTGGGGTGTTCCCGGTCTGCAGTGGTCAGTATCTATCAAGAGTGCTCCAAGGAAGGAACTGTGGTGAACCGGAGACAGGGTCATGGGCGGACAAGATGCACGTGGGGAGCGAAGGCTGGCCCGTGTGGCATCAGAACTGGACCACAGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACATGAATGGCCGGGTGCGTGTGTGTCGCTTACCTGGGGAACACATGGCACCAGGATGCACTATGGGAAGAAGGCAAGCCGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTGCAGACCATGTACACCCTTTCATGGAAACGGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCACCCTGCCACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38784 True 561 TUCP 0.54 2 15939357 15939950

Neighbor

gene id symbol gene type direction distance location
CI01000004_15906907_15909647 HNRNPC coding upstream 29688 15906907 ~ 15909669 (+)
CI01000004_15892502_15900203 DCAF8 coding upstream 38505 15890373 ~ 15900852 (+)
CI01000004_15867404_15875293 NA coding upstream 64053 15866985 ~ 15875304 (+)
CI01000004_15859240_15861471 APOL1 coding upstream 75908 15859240 ~ 15863449 (+)
CI01000004_15825817_15827475 TEP1 coding upstream 111754 15825817 ~ 15827603 (+)
CI01000004_15947153_15953245 NA coding downstream 7203 15947153 ~ 15953870 (+)
CI01000004_16008731_16013012 NA coding downstream 68665 16008615 ~ 16013049 (+)
CI01000004_16017111_16024481 SALL2 coding downstream 77035 16016985 ~ 16024782 (+)
CI01000004_16037124_16044487 MMP14, MMP14A, MMP14B, MT1-MMP coding downstream 97174 16037124 ~ 16044563 (+)
CI01000004_16090188_16090874 NA coding downstream 149476 16089426 ~ 16090928 (+)
G34216 NA non-coding upstream 10607 15928501 ~ 15928750 (+)
G34215 NA non-coding upstream 14861 15923704 ~ 15924496 (+)
G34214 NA non-coding upstream 18471 15920683 ~ 15920886 (+)
G34213 NA non-coding upstream 51823 15887278 ~ 15887534 (+)
G34205 NA non-coding upstream 95955 15843132 ~ 15843402 (+)
G34228 NA non-coding downstream 74956 16014906 ~ 16015106 (+)
G34229 NA non-coding downstream 79313 16019263 ~ 16019489 (+)
G33830 NA non-coding downstream 218762 16158712 ~ 16160998 (+)
G34266 NA non-coding downstream 240558 16180508 ~ 16180849 (+)
G34297 NA non-coding downstream 361283 16301233 ~ 16309306 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 847388 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1902457 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3283646 12646838 ~ 12652570 (+)
G31865 NA other upstream 3744210 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4271698 11666900 ~ 11667659 (+)
G33815 NA other downstream 123465 16063415 ~ 16066464 (+)
G34400 NA other downstream 1037378 16971995 ~ 17025976 (+)

Expression


Co-expression Network