G34639


Basic Information

Item Value
gene id G34639
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16123560 ~ 16136696 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU39324
ACCGCTAATTAAATCTAAAAAAAAAAATAAAAAAAATCCAACCTTTGGCCAGCTCAACTATGCATCGTCCACTGAGCTCCGTCGTCTCACCCTTACTGAAAACCTGAGAAACACAGATTGTAAACAAATATTTAGCCACCTGTTTGCCACCTGTTGGAGTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGATATTCAACAGTGCCTTGATCTTTCTGCATTGACACCATTTTCTTTAAGAGCTGCTGTGCAGCCAAAATTATATACCAGTTATCACTGTAAAGCTGCTTTGACACAATCTGCATTGTAAAAAGCACTATATAAATAAAGGTAACTTGACTTGACTTAGCAAGATATATTTGTTATATTATAATCATATCCATTTCACATAAACAATCCTAATTAATATCTGGGACAATTAAAAATTGCTTACTTTTGAAGGCGCCTCACCATGAGATGTATACTGACTAATTAACTCAGTCTGAACTGCCCCTGGCCAGAGGCTTACAGAAACCACACCCGTCTTCTTCAGCTCTACTGCCATGTCCGCTGCCATTCTGTCACACTGAAGAAAAGAACCGAAAGAAAGATGGAGCATAAATGCTCTGAGAATAATGAAGAAATAGTATACAACACACTCTGTGCAACCGAAATAATCTGGCTTTCAAATATGATACACTGAGGACTGCAAATATAGAATCTGTAATGTAGTGACTCACTGCAGCCTTGCCGACCCCATAGGATACATTAAAGAGATAGCGCAGGCCACCCATTGATGATATGAACACAATCAAGCCCTTGCCCTCAGCCACCATCATCCTTGCAGCATACACTGAGCAGAAATAGTGACCCCTGTAAAAACACAATGACCATGATCTCTGATATGGCTCTGAAAGGACTAAGCAAATTAATTGTCATGAATAAGTCGTATCGTGATTTTTCAATTTGATTCAATTCATTGTTCAGCCCTGCTTTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39324 True 1005 lncRNA 0.37 2 16123560 16136696

Neighbor

gene id symbol gene type direction distance location
CI01000004_16092821_16115520 NA coding downstream 8030 16092706 ~ 16115530 (-)
CI01000004_16079875_16086958 ACIN1, ACIN1A coding downstream 36349 16079875 ~ 16087211 (-)
CI01000004_15999644_16005705 NA coding downstream 117135 15999495 ~ 16006425 (-)
CI01000004_15991836_15995032 CBLN12, CBLN3, CBLN1 coding downstream 128376 15991640 ~ 15995184 (-)
CI01000004_15965178_15990162 CHD8 coding downstream 133385 15965120 ~ 15990175 (-)
CI01000004_16146406_16149756 NA coding upstream 9380 16146076 ~ 16149756 (-)
CI01000004_16152238_16154327 NA coding upstream 15037 16151733 ~ 16154327 (-)
CI01000004_16155534_16158067 NA coding upstream 18676 16155372 ~ 16158067 (-)
CI01000004_16160899_16178772 AP1G2 coding upstream 23661 16160357 ~ 16179144 (-)
CI01000004_16183581_16194877 SLC7A8A, SLC7A8B, SLC7A8 coding upstream 46326 16183022 ~ 16194877 (-)
G34837 NA non-coding downstream 98779 16023244 ~ 16024781 (-)
G34836 NA non-coding downstream 100437 16019558 ~ 16023123 (-)
G34830 NA non-coding downstream 124413 15998819 ~ 15999147 (-)
G34583 NA non-coding downstream 178896 15930375 ~ 15944664 (-)
G34814 NA non-coding downstream 194810 15928443 ~ 15928750 (-)
G34866 NA non-coding upstream 96615 16233311 ~ 16233711 (-)
G34867 NA non-coding upstream 97136 16233832 ~ 16234289 (-)
G34868 NA non-coding upstream 99661 16236357 ~ 16236643 (-)
G34869 NA non-coding upstream 100194 16236890 ~ 16302100 (-)
G34796 NA other downstream 259812 15860613 ~ 15863748 (-)
CI01000004_15832789_15836192 NA other downstream 287329 15832573 ~ 15836231 (-)
G34633 NA other downstream 335663 15787386 ~ 15787897 (-)
G34718 NA other downstream 841911 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 1033202 15086671 ~ 15087575 (-)
G34934 NA other upstream 265049 16401745 ~ 16421506 (-)
G34982 NA other upstream 366029 16502725 ~ 16515974 (-)
G34995 NA other upstream 392746 16529442 ~ 16533008 (-)
G34999 NA other upstream 400499 16537195 ~ 16541278 (-)
CI01000004_16596848_16599652 NA other upstream 441971 16596476 ~ 16601205 (-)

Expression


Co-expression Network