G34266


Basic Information

Item Value
gene id G34266
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 16180508 ~ 16180849 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU38831
CCCTCCCAATAATTGGAAATGGCCAAACTGTCCCCCCGATATTTGATATTTCTTAATGCTGCTCTCCATTACTCTCCGCTCTATTTGTTGTTAGGATGACAGACAGTTTAAAAAGTTACATTTTTAGGCTGGTCTGCCTCAGCGGTCTAACAGCGCTCGTCAATGTCAAAATGACAGCCAATCAGATCAAAGAAGGCGGGGCTTACAATTCACTGAAGACGAGTGTGAATTCCAACATGACGCTTTTAGTTTTTACAGTGAAAGAGTGTGTGCGTGGGAAGATATAAGTAGCTAAACATTTAATATTTATAACTCTTTTAAGATGGATATGTTTAACGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38831 True 342 lncRNA 0.43 1 16180508 16180849

Neighbor

gene id symbol gene type direction distance location
CI01000004_16138496_16143438 NA coding upstream 36391 16138496 ~ 16144117 (+)
CI01000004_16117960_16125599 DHRS1 coding upstream 54634 16117884 ~ 16125874 (+)
CI01000004_16090188_16090874 NA coding upstream 89580 16089426 ~ 16090928 (+)
CI01000004_16037124_16044487 MMP14, MMP14A, MMP14B, MT1-MMP coding upstream 135945 16037124 ~ 16044563 (+)
CI01000004_16017111_16024481 SALL2 coding upstream 155726 16016985 ~ 16024782 (+)
CI01000004_16217935_16218580 NA coding downstream 37004 16217853 ~ 16218580 (+)
CI01000004_16221780_16232426 PSMB5 coding downstream 40931 16221780 ~ 16232940 (+)
CI01000004_16346680_16401924 NA coding downstream 165831 16346680 ~ 16401924 (+)
CI01000004_16407140_16438873 NA coding downstream 226136 16406985 ~ 16439250 (+)
CI01000004_16467711_16471121 NA coding downstream 286862 16467711 ~ 16471507 (+)
G33830 NA non-coding upstream 19510 16158712 ~ 16160998 (+)
G34229 NA non-coding upstream 161019 16019263 ~ 16019489 (+)
G34228 NA non-coding upstream 165402 16014906 ~ 16015106 (+)
G34216 NA non-coding upstream 251758 15928501 ~ 15928750 (+)
G34215 NA non-coding upstream 256012 15923704 ~ 15924496 (+)
G34297 NA non-coding downstream 120384 16301233 ~ 16309306 (+)
G34322 NA non-coding downstream 267997 16448846 ~ 16449090 (+)
G34323 NA non-coding downstream 268831 16449680 ~ 16455626 (+)
G34330 NA non-coding downstream 291158 16472007 ~ 16472233 (+)
G34277 NA non-coding downstream 460493 16641342 ~ 16646222 (+)
G33815 NA other upstream 114044 16063415 ~ 16066464 (+)
G34220 NA other upstream 240558 15939357 ~ 15939950 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 1088539 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 2143608 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3524797 12646838 ~ 12652570 (+)
G34400 NA other downstream 796479 16971995 ~ 17025976 (+)

Expression


Co-expression Network