Gene
RNA
| Item | Value |
|---|---|
| gene id | G34330 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 16472007 ~ 16472233 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38905 | True | 227 | lncRNA | 0.41 | 1 | 16472007 | 16472233 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_16467711_16471121 | NA | coding | upstream | 500 | 16467711 ~ 16471507 (+) |
| CI01000004_16407140_16438873 | NA | coding | upstream | 32757 | 16406985 ~ 16439250 (+) |
| CI01000004_16346680_16401924 | NA | coding | upstream | 70083 | 16346680 ~ 16401924 (+) |
| CI01000004_16221780_16232426 | PSMB5 | coding | upstream | 239067 | 16221780 ~ 16232940 (+) |
| CI01000004_16217935_16218580 | NA | coding | upstream | 253427 | 16217853 ~ 16218580 (+) |
| CI01000004_16490931_16555397 | CARMIL3, LRRC16B | coding | downstream | 18698 | 16490931 ~ 16555993 (+) |
| CI01000004_16567132_16570668 | NA | coding | downstream | 94899 | 16567132 ~ 16571368 (+) |
| CI01000004_16579927_16586961 | NA | coding | downstream | 107694 | 16579927 ~ 16587197 (+) |
| CI01000004_16649360_16654303 | NA | coding | downstream | 176938 | 16649171 ~ 16654353 (+) |
| CI01000004_16695941_16729500 | NA | coding | downstream | 223400 | 16695633 ~ 16729719 (+) |
| G34323 | NA | non-coding | upstream | 16381 | 16449680 ~ 16455626 (+) |
| G34322 | NA | non-coding | upstream | 22917 | 16448846 ~ 16449090 (+) |
| G34297 | NA | non-coding | upstream | 162701 | 16301233 ~ 16309306 (+) |
| G34266 | NA | non-coding | upstream | 291158 | 16180508 ~ 16180849 (+) |
| G33830 | NA | non-coding | upstream | 311009 | 16158712 ~ 16160998 (+) |
| G34277 | NA | non-coding | downstream | 169109 | 16641342 ~ 16646222 (+) |
| G34357 | NA | non-coding | downstream | 193347 | 16665580 ~ 16672434 (+) |
| G34359 | NA | non-coding | downstream | 200311 | 16672544 ~ 16672767 (+) |
| G34361 | NA | non-coding | downstream | 201688 | 16673921 ~ 16674301 (+) |
| G34362 | NA | non-coding | downstream | 202272 | 16674505 ~ 16674814 (+) |
| G33815 | NA | other | upstream | 405543 | 16063415 ~ 16066464 (+) |
| G34220 | NA | other | upstream | 532057 | 15939357 ~ 15939950 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | upstream | 1380038 | 15091200 ~ 15097173 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | other | upstream | 2435107 | 14035393 ~ 14039142 (+) |
| CI01000004_12646972_12652534 | NA | other | upstream | 3816296 | 12646838 ~ 12652570 (+) |
| G34400 | NA | other | downstream | 505095 | 16971995 ~ 17025976 (+) |
