CI01000005_04401277_04428207


Basic Information

Item Value
gene id CI01000005_04401277_04428207
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 4401248 ~ 4428207 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_04401277_04428207.mRNA
GGCGGGCTTGAAAGCCATGGCCGAACCGATACATGCTTTGTGCAATGAGCTTATAAAGGCCGTGAATGTGATGATGGAGGCAGAATCCAGTCAGACATACCGCCTGGAGGCCCTTAAGTTTATTGAAGATTTCAAAGAGAAAAGTCCTTTCTGCATTGAATGTGGTCTTCAGTTAGCGGAGAAATCCCAGACTGCAGTGGTCAGACACTTTGGGCTGCAGATACTGGAGCATGTAGTCAAGTTTCGGTGGAATAACATGGCTCCGCAAGAAAAGCTCCGTCTGAAGAACTGCACTATGGGCCTGTTGTCACATGGTACACATCCAATTCTGCAACAGGAATGTCATGTTAAGGATGCGCTCTCACGCATAGTAGTTGAGATGATCAAGAGAGAGTGGCCGCAGCACTGGCCTGACATGCTGAAGGAGATGGAGGCCCTGACTGCTATGGGGGATGCTCAGACAGAACTTGTAATGCTTGTACTGCTGCGGTTAGCTGAGGATGTGATGACATTTCAGACATTACCCACTCAAAGACAGCGAGAAGTCCAGCACGCCCTCGAGGAGAATATGGGCAGCATCTTCACCTTCCTGCGTGGCATTTTAATTATGCAGCTTCATGTGAATGAGTACAACAAGTTGAAATGTGTTGCTGGTCTGGAATTGAAGACAAAAGCTCACTGGCGAGTTGGTGTGACCACTCTCAACACTCTGGCTGGCTACATCGATTGGGTTGATCTGAACCACATCACCAATGAAAACTGCCGTCTTTTGGAGATCTTGTGCCTGTTGCTGAGCGAACCTGAGCTTCAGTTGGAGGCTGCAGAGTGTCTGCTAATTGCCATTAGTAGGAAAGGAGAGTTAGAAGAGAGGAAGCCATTTTTGATGCTCTTTGATGAAGTCATCATGAACTACATCCTGTCTGCTGCACAATCATCAGGTGCCATTGTGGAAAGAAGATACACATTTTTGAAGAGGCTGTGTCAGGTTCTCTGTGCCCTGGGTAGCCAAATCTGCTCTCTAGTGTTTCTGAGGTCGTCCACGCAAATGACCTGGGGAAACCTATTCCGACATGAAATTATATCGTGGGATCCTGTAATTGGCCAAATGGCCATAAAATATTTAAGAGCGGCAAGGATCAATCTTGTGAAAGCTGGATTTCCCTCCAAGAATGATTGTCCAGGTTGTGAATTCTCCAGAGTGGACTTTGATAGTGATGAAGATTTCAACTGCTTCTTTAAGTCTTTCAGGGCTCAGCAGGGGGAAGCAGTTCGTCTGGCTTGTAAAATTGTCCCGTTTGAGACCTTTCAAATTGCAAGGGAGTGGGTGCAGTATCAGATCAACACACCTATAGATACTGGGAATTCAACATCGGTTCAGTGGGATGCCATGACTTTCTTCACTGAAAGTGTATTTGGACAGCTCTTCAAAATCCTTGACAAAGAGGCAAGACCAACCAATTTCTGTCATGGTGCAGCAAAACTTCCCATGGATGAGGGCATGGAGCTGCTGCAGATGGTTGTAAACTATGAGACTAGAGATCCTCTCATTCTGTCCTGTGTTCTTACCATCATATCCACTTTCTTTCCCTTTGTCAAACACCAACCTCACTTCCTGCCTCAAGTACTCTCTAAGATATTTACTGCCACCACATTTGAATTGGTTGATGAACGCAAGGCACCTCGAACGCACCCTCTTAAGAACGTCAGAAGACATGCCTGTTCCTCCATCATTAGGATGTGTCGAGATTATTCAGACTTTATTCTGCCGTGCTTTGACATGATGTATGAGCATGTGAAGAGCTTGTTCTCCAATAAGAAGCTGCTGACACCGATGGAGAAAAGTTCTCTTATGGAAGCCCTGATACTGATCAGCAATCAGTTTAAAGACTATAACAAGCAGAAAGCCTTCCTGGAGGAACTCATGGCACCTGTTACTGCACAGTGGCTGTCAGAGGAGATGAGGAGCGTTTTATGGGATCCTGCTACCTTCTTGGCGTATGTTGGTGCTGACCATTACTCTGAAACTGGCAGTGCATTTGTTTATTTGCCAGCAACCTGTCAAAATATTAGTTTTTGTGTGTACACCATGCTTGGGGTTGTGAAGCATGCTCGTTGGCCCGCTGATCCTGAGGAGGCAAAAGCAGGCGGATTTATGATCAGCACTAACTCTGATGGGACCCCCGTCTACAGAAACCCTTGTGCAGAGCCCCTGCAGGCCCTGCTGCCCAACCTTTTGGCCCTCATCAGGACCCACAACAGCTTGTTCTTGCCAGAGAACGTCAAACTTCTTAGCAAGACCTTTACTAGAGTCTATGATGATATGGATATGGAGGAAAATTCTGTTTTAGGAATTTCTCAACCAGTTTTAGATTCCTACGACTCTACAGTGTACAAAAACATTGTTGAGCGAGGCTTCTTCACCGCACTCTACAGAAACTGGTTGGAACAATCAAGTTCAATGATTGATTTTTCTTTATTGTTTGTTTAATAGAATATTTCTTTTCCAATAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_04401277_04428207.mRNA True 2517 mRNA 0.45 21 4401248 4428207

Neighbor

gene id symbol gene type direction distance location
CI01000005_04332499_04357527 XPO5 coding downstream 42391 4332490 ~ 4358857 (-)
CI01000005_04296779_04299727 NA coding downstream 101463 4296209 ~ 4299810 (-)
CI01000005_04161239_04162612 NA coding downstream 238002 4160972 ~ 4163246 (-)
CI01000005_03986570_03989555 PRPH2B coding downstream 411693 3986099 ~ 3989555 (-)
CI01000005_03714714_03715575 NA coding downstream 685607 3714273 ~ 3715641 (-)
CI01000005_04443111_04445092 NA coding upstream 14846 4443053 ~ 4445092 (-)
CI01000005_04624198_04638644 NA coding upstream 195789 4623996 ~ 4638644 (-)
CI01000005_04731666_04732248 LHB coding upstream 303381 4731588 ~ 4732248 (-)
CI01000005_04738995_04739378 NA coding upstream 310412 4738619 ~ 4739378 (-)
CI01000005_04751377_04754904 NA coding upstream 322290 4750497 ~ 4754904 (-)
G38537 NA non-coding downstream 33241 4366516 ~ 4368007 (-)
G38530 NA non-coding downstream 92074 4308961 ~ 4309174 (-)
G38517 NA non-coding downstream 172683 4226726 ~ 4228565 (-)
G38512 NA non-coding downstream 185710 4215272 ~ 4215538 (-)
G38719 NA non-coding upstream 113695 4541902 ~ 4542173 (-)
G38721 NA non-coding upstream 115130 4543337 ~ 4543809 (-)
G38724 NA non-coding upstream 119589 4547796 ~ 4548225 (-)
G38725 NA non-coding upstream 120394 4548601 ~ 4548844 (-)
G38729 NA non-coding upstream 123558 4551765 ~ 4552030 (-)
G38415 NA other downstream 138 4381238 ~ 4401110 (-)
G38510 NA other downstream 195040 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 2511972 1883222 ~ 1899867 (-)
G36628 NA other downstream 2736969 1663267 ~ 1664279 (-)
G36049 NA other downstream 3357576 1021295 ~ 1043672 (-)
G39515 NA other upstream 1405585 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 2052482 6481355 ~ 6483265 (-)
G40487 NA other upstream 2767588 7195795 ~ 7196428 (-)
G40540 NA other upstream 3098014 7526221 ~ 7532148 (-)

Expression


Co-expression Network