G40540


Basic Information

Item Value
gene id G40540
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7526221 ~ 7532148 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU46013
TTGCAGGACCAAATTTAATCTGAAAATTGTAAAAAATATCAAATTTATACAAATGCTCTTTAACGGAGATGGTGCTAGTAGGAAATTGTACAAAAATTAGGGGAAAAACAAAAACAGCTAATAATATTGAGTCTAAGGTTGTGAAAGTCATTGAGGAACAGCGCCGTATTCTCTGGACAGAGCTGATCTGAGATCAGTCTCACACACCAAACACTCCTCGTACTGCAATTTAATGTTTTAAAAACCAACATTGCAAATCCTAGCCTGAATCACAGACATCCGATTATAAAGGTTAATAACGGCCTCACCTGCGCACTAAACACGGCACCGGCGAGATCTCCTGTCAATCATTAAAAAAACACAAACGTCCAGAAGAATTAATTAAAAAAGGAAGTAGCCTGCTGAACTTGAGCCACGTTACAGCAGCTCTTCAGTCCCAGAGTTTGAGCCAATCCAGCGTTCATCAGCGCGGCTAGTCCTGCTAGCCTCTCCCATCAGCACGACTGCTGCTGCTGTGATTGGCTCCCTGCGCTCCTCTGGATCAGGTGGGGTGGAGATAGAGGCCGGGCACAGCGGACACGTGACTGCAGACGGCTTTATGAGCCCAGACGAGGCCGCTTGCGTGGCGACTGCTCCTCGTCATCGTCCTCCTCCTCATCTTCATCATCTGGATAATCCACCAGACCCACCAGTCCAGTCCGTGCCGTCTGGCCAGAAGGAGGCGCTGCAGGTTTGGAGCTGCTGGAGGAAGATGAGGGTGGAGGTTTGGAACCGTTGCTTGCGTTGGCCGCCGCTGCTGAATGAGAGAAGGTGAACTTAAAGCTGCCTGTCGTTGTGCGCTTGGGCTGGTTCTCTTTGTCTTGACTTTCTTTAGCTTTCTCGCTCTCCATGAACTTCCCGTAGTCGCTCTTGCTCTTCTCGAAGCCAGTGTCAGAGACATCCTCCTCTTCCTCGTCATCATTCAGCCACATGTCTTCGTCCTCCTCAAACGAGCGTGCGTCTCTGCGGTACCTGCTGAGTCCTCGGCTCTGCCGCTCTTTCTCCTGCTCGTAGCGGCCCTTCAGACCCTTGAATGTCTGCACGTACTCGATGGACTCCAGCGCCTTGTAGAAGTTATCCACGATGTGTGCGATGAGAGACCGGATGTCCTCCACTTTGATGAACTCGAAGAGCTCGATGATGGCCGAGTTCAGCAGGTTGTATCTGGTGCCGTTGTCCAGCAGGGCGTTGATGACCGGCTCAAACAGGTTTCCTTTCACGATGTAGCGGTTGTAATACTCGTCCTTCAGTCCAATGATCCTCCTCATGAAGCGCAGGGCACACAGCGCCAGGAAGGTGTGTTTGGAGTTCATGAGCGTCAGCACTCTCCTCAGCAGGTCTTTAGTCATGATGTAGTTCTTGATGTGGTACGTGTGGTGCTCCACGCAGAACGTCAGCAGCTCCAGGATCAGAGCCAGCAGCTGCGCCGTCTGGAAGTTATCTGGACACACGGGGTTGACTCTAGCCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46013 True 1509 TUCP 0.51 7 7526221 7532148

Neighbor

gene id symbol gene type direction distance location
CI01000005_07436839_07437813 NA coding downstream 87797 7436065 ~ 7438424 (-)
CI01000005_07398684_07399164 MPC1.S, MPC1, MPC1.L coding downstream 127057 7398487 ~ 7399164 (-)
CI01000005_07373961_07374634 NA coding downstream 151587 7373410 ~ 7374634 (-)
CI01000005_07355833_07360372 NA coding downstream 165849 7355833 ~ 7360372 (-)
CI01000005_07190084_07218097 NA coding downstream 308088 7189596 ~ 7218133 (-)
CI01000005_07591912_07592984 NA coding upstream 59764 7591912 ~ 7592991 (-)
CI01000005_07593934_07596058 RPS27A, DENND5B coding upstream 61778 7593926 ~ 7596058 (-)
CI01000005_07617632_07620944 NA coding upstream 85417 7617565 ~ 7620944 (-)
CI01000005_07622471_07624184 NA coding upstream 89192 7621340 ~ 7624184 (-)
G40586 NA non-coding downstream 41698 7484324 ~ 7484523 (-)
G40585 NA non-coding downstream 44499 7481523 ~ 7481722 (-)
G40580 NA non-coding downstream 57983 7458821 ~ 7468238 (-)
G40566 NA non-coding downstream 98309 7427699 ~ 7427912 (-)
G40564 NA non-coding downstream 100255 7425711 ~ 7425966 (-)
G40602 NA non-coding upstream 68397 7600545 ~ 7602965 (-)
G40604 NA non-coding upstream 73901 7606049 ~ 7606279 (-)
G40487 NA other downstream 329793 7195795 ~ 7196428 (-)
CI01000005_06481721_06483251 NA other downstream 1042732 6481355 ~ 6483265 (-)
G39515 NA other downstream 1691682 5833792 ~ 5834539 (-)
G38415 NA other downstream 3125111 4381238 ~ 4401110 (-)
G38510 NA other downstream 3320013 4204845 ~ 4206208 (-)

Expression


Co-expression Network