CI01000006_00502041_00503898


Basic Information

Item Value
gene id CI01000006_00502041_00503898
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 502041 ~ 504306 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_00502041_00503898.mRNA
AAGCTCAGTTCTCTGAACTGAAGGTCCTCAAAGCCGCTGGAGAAGACTTGACCGACCGTGACCGGCGGCTGACAGGGGTGGACAAGAGGGCGAGTCCCCTCAAGAGCAGAAGGAGGGGAAGGTCCGGGACTGTGGAGAAAGAGGATGGGCGCTCTTTATTTCAGGAGTGCTGCTACTGCGACTGCGTCTGCAAAGCCACAACACATCAGCCTGTTCTTTCACCCCTCATTAACTTTGATGTGTCTGCCAAGAAGCCTCAAGGTAACATCAAGGTCCTCGGCATTCGACTGAGCCTCTCTTTATCATACTCTGTTAAAAGATACTGACTGAAGCTACACCCTTCTAGAAAATACACCAGTCTGAATGACCCTGAAGTAATGAGAAAGGAATTCAGTGGCTGCAAACAGACTTACTGAAAGGTAAAAATATGTATTGAAACATTCACAACTAATTTAATTTCTGTAATGTGACATATTTCTGAATAAAACTGAATATTCAACAGGAAATGCTGTAGGGCAAGATTTTATCTATCTGGATTTAACTGGATTGTAGATTTGTTTGTTTATTAAGTTTTTCATGTTAGCATCATGGCTATTTACATGGCAAACACAAAGGTCAGTATCATCCATAAAATTTACGTTATTATATAAAACATTTCAACTTAACATAAGATAGAAATTCTAAAATACGTTTGGGTGATACATTTTGAAATATTCCATGCAAGCATGTTTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_00502041_00503898.mRNA True 734 mRNA 0.40 3 502041 504306

Neighbor

gene id symbol gene type direction distance location
CI01000006_00423835_00428157 NA coding upstream 73672 423093 ~ 428369 (+)
CI01000006_00418370_00420217 SPAG16 coding upstream 81724 418370 ~ 420317 (+)
CI01000006_00363989_00372189 NA coding upstream 129777 363989 ~ 372264 (+)
CI01000006_00315992_00319208 NA coding upstream 182655 315062 ~ 319386 (+)
CI01000006_00297085_00312816 CORO6 coding upstream 188986 297085 ~ 313055 (+)
CI01000006_00537552_00548276 NA coding downstream 33146 537452 ~ 548591 (+)
CI01000006_00586425_00608567 NA coding downstream 81662 585968 ~ 609091 (+)
CI01000006_00612891_00618198 RBM22.S, RBM22 coding downstream 107681 611987 ~ 618372 (+)
CI01000006_00647015_00654423 NA coding downstream 142709 647015 ~ 655017 (+)
CI01000006_00666971_00667988 NA coding downstream 162487 666793 ~ 668405 (+)
G40768 NA non-coding upstream 9729 488407 ~ 493026 (+)
G40767 NA non-coding upstream 17856 360009 ~ 484185 (+)
G40811 NA non-coding upstream 148078 353720 ~ 353963 (+)
G40800 NA non-coding upstream 196775 305007 ~ 305266 (+)
G40799 NA non-coding upstream 198814 303015 ~ 303227 (+)
G40852 NA non-coding downstream 24822 529128 ~ 551356 (+)
G40904 NA non-coding downstream 122427 626733 ~ 630432 (+)
G40935 NA non-coding downstream 210598 714904 ~ 715650 (+)
G40925 NA non-coding downstream 219515 723821 ~ 786328 (+)
G40772 NA other upstream 22847 475465 ~ 479194 (+)
G41170 NA other downstream 1187759 1692065 ~ 1695821 (+)
G41424 NA other downstream 2141356 2645662 ~ 2660570 (+)
G41591 NA other downstream 2331861 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 3224924 3734554 ~ 3736035 (+)
G41996 NA other downstream 4612900 5117206 ~ 5124149 (+)

Expression


Co-expression Network