CI01000006_02374902_02382000


Basic Information

Item Value
gene id CI01000006_02374902_02382000
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2374832 ~ 2382401 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02374902_02382000.mRNA
CTATAAAAATAATTTGCCTACGCTAGCGTTGTACACACTTATATGTTAATAAATTGAATTTCAGTAACCAATGTCGGACGGTCGGATAATATTTTCTGTCCCCTCCCCCTCTTTTGGACCTGTTTCTGGAGGACTTGAGAGTTGGCGGAGCTCAGGCACAGAAAGCGGTCAGGCACTTCGACATGGAAGTGATTTTCAAAAGCGAAAGGAGGACGAACGGATTGACGTCTGCTTAATCGTCGCCGAAAGTCCAGTTCGGTTTTTACGTGAAGCTCCAAAAATCTATGAAATGTGTTTGCATGTTCTTCTGGATGTAGAGGTGGGATTGCGAGAATCGAAAGGTTGGCTACATGATTTCTGGAAGTGGAGAATAAGCTTTTTCTCCCTTCTTTTTGCCATCAATCTCAACGACAGGCTTGGAGAAGGGGCGCTCGGACAGTGGAAGCCCTCCCCTCTGCTCGGATCTGCCTTGGTAGGTGCGAATAAAAAAGGGGCCAGTGTTTGCAAATATGCAGATACATCGAAAGGGGGGGAATCATACTTTGTTGAAGTCTGCTCAAAGTTGGGATGTCATCTTCCTAACGATCTTGTTGGCTGGGAGAACGGGAGAATGATTGTACCGTACATTGTCAGTCGTGCTGCTGCAGACCGTACACTGGCACCGCAGAGACCCAGGTTTCAGATCATTGAGTCTAGACAAAAGTCATTAACTTTCACTATGACGCAAAGAGTTGGGAGAAGTTTTCAAGCGCATTTAACTTTGAGCTATGGAAATGCTCAGGATGCCGCTCGACACATCTGGTTGAGCGAGCTCTGAAAACATGAATTATTGTCAACGTCCTCTGGATCTAGTGCTAGTGTGTAGTGCTTGCGTGTGAGAGCGTGCATGCGTGAGTGAGTGAGTGTATGTGTGTGTGTAATCGTGAAGCGGTGTGAGGAAGAAAGACAGCGGCAGGGGGAGATAGGGGTGTGCGTGTCTTGAGGGAGATGTTACGTTCGACTCCGCATTACCTGAATTACTCGATATATGCCTGCGTGACGTTGCGAAGTAATCTCACAGTTATTTTTTTAGAGACTTCATTTTCTTAGTGGCAATAGATTATCAATTACTTTAAAAGTGTCTTGAAAATTAATTTTACAAATGTTAGAAGTTTAGTGTTCTTGATTGGCTGACTGTAAAACGTTTTTTTTTTTTTTTTTAAAGTAAACTGGTAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02374902_02382000.mRNA True 1218 mRNA 0.44 4 2374832 2382401

Neighbor

gene id symbol gene type direction distance location
CI01000006_02274089_02276641 NA coding upstream 98151 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 115193 2241091 ~ 2259639 (+)
CI01000006_02181904_02185719 NA coding upstream 188540 2180910 ~ 2186292 (+)
CI01000006_02157297_02159922 FABP6 coding upstream 214864 2157297 ~ 2159968 (+)
CI01000006_02134157_02143363 NA coding upstream 231072 2134157 ~ 2143760 (+)
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding downstream 14067 2396468 ~ 2399951 (+)
CI01000006_02490349_02491048 NA coding downstream 107948 2490349 ~ 2491118 (+)
CI01000006_02531899_02588907 NRG2A coding downstream 149415 2531816 ~ 2589763 (+)
CI01000006_02613864_02614742 NA coding downstream 231353 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 234079 2616480 ~ 2616839 (+)
G41387 NA non-coding upstream 101563 2273046 ~ 2273269 (+)
G41344 NA non-coding upstream 105568 2267329 ~ 2269264 (+)
G41360 NA non-coding upstream 148855 2199065 ~ 2225977 (+)
G41347 NA non-coding upstream 211801 2162556 ~ 2163031 (+)
G41328 NA non-coding upstream 242485 2131993 ~ 2132347 (+)
G41441 NA non-coding downstream 31950 2414351 ~ 2414581 (+)
G41449 NA non-coding downstream 48423 2430824 ~ 2431137 (+)
G41452 NA non-coding downstream 54003 2436404 ~ 2436629 (+)
G41453 NA non-coding downstream 54829 2437230 ~ 2437452 (+)
G41457 NA non-coding downstream 60211 2442612 ~ 2442976 (+)
G41170 NA other upstream 679011 1692065 ~ 1695821 (+)
G40768 NA other upstream 1881806 488407 ~ 493026 (+)
G40767 NA other upstream 1891497 360009 ~ 484185 (+)
G40772 NA other upstream 1895638 475465 ~ 479194 (+)
G41424 NA other downstream 263261 2645662 ~ 2660570 (+)
G41591 NA other downstream 453766 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1346829 3734554 ~ 3736035 (+)
G41996 NA other downstream 2734805 5117206 ~ 5124149 (+)
G43896 NA other downstream 3387688 5770089 ~ 5771775 (+)

Expression


Co-expression Network