CI01000006_02490349_02491048


Basic Information

Item Value
gene id CI01000006_02490349_02491048
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2490349 ~ 2491118 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02490349_02491048.mRNA
CTGGTGTTTCCCGATTGCAAATCTATCGGAAAAAAGCAGCGGATCCCGATGGCATGGACACTTACGCAAGGTCTGCCGCGCCGCCGTGCTACTGGAGCCTATTCGCAGTCTCTTCAGCCTTCAACCCAGCTCCACCGCCATCGCCCCGCAGCCCTGCCGCAACGCGACCACCGACCATCGAGCCAAAGCAGGCGGCATGAGGAGGCTTGATTCGGTACACTTATCCATGCTGCTCATCGGGGTCTCCTTCGCCTGCTACTCCCCGAGTCTGAATTCCCTGCAGGACCAGGCTTACAGATCCGCCGTGGTGATTGAGGGCAAGGTGCAGTCCGCGCCTCAGAACGTCTCAGCGGAGCCGTACAGTGTGAATGTCAAAGTCCTGGACGTGTGGCCGCGGAACAGCGGGGGTCTGGAGCGGGAGCAGCTCGTCACCGTGGGGGAATTTGGCTCGGAGGCTCCGTGCGCCAAAGTGAAGAAGAATCACAAGTATATATTTTTCATGGACCCAACTGATGAACCCTTGGTTTTTAAAGCGTCGTTTGCGCCTTTAGATACAAGTGGAAAGAACCTGAAAAAAGATGTTGGGAGGATCTTGTGTGAAGACTGCGGTAAGTTTATGCCCACAAAACGCTTGTGCAGGGGCTTGCAAATTGACATTGGCCGTCGGCTTCGGTTGTATGCTTATGTGTGGTGCGGATGACATCCAAATGTTTGGTGTAAGTAACAGATGGGGGCTTGTGGGGGCGTCTCTGCAGCAATATTGGGCAGGA

Function

GO: NA

KEGG:

id description
K05456 NRG2; neuregulin 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02490349_02491048.mRNA True 770 mRNA 0.55 1 2490349 2491118

Neighbor

gene id symbol gene type direction distance location
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 90398 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 107948 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 213668 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 230710 2241091 ~ 2259639 (+)
CI01000006_02181904_02185719 NA coding upstream 304057 2180910 ~ 2186292 (+)
CI01000006_02531899_02588907 NRG2A coding downstream 40698 2531816 ~ 2589763 (+)
CI01000006_02613864_02614742 NA coding downstream 122636 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 125362 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 174831 2665949 ~ 2677215 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 282946 2774064 ~ 2933983 (+)
G41461 NA non-coding upstream 44415 2445724 ~ 2445934 (+)
G41457 NA non-coding upstream 47373 2442612 ~ 2442976 (+)
G41453 NA non-coding upstream 52897 2437230 ~ 2437452 (+)
G41452 NA non-coding upstream 53720 2436404 ~ 2436629 (+)
G41449 NA non-coding upstream 59212 2430824 ~ 2431137 (+)
G41423 NA non-coding downstream 119113 2610231 ~ 2626186 (+)
G41482 NA non-coding downstream 141096 2632214 ~ 2632830 (+)
G41433 NA non-coding downstream 142985 2634103 ~ 2644385 (+)
G41488 NA non-coding downstream 209489 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 218408 2709526 ~ 2710015 (+)
G41170 NA other upstream 794528 1692065 ~ 1695821 (+)
G40768 NA other upstream 1997323 488407 ~ 493026 (+)
G40767 NA other upstream 2007014 360009 ~ 484185 (+)
G40772 NA other upstream 2011155 475465 ~ 479194 (+)
G41424 NA other downstream 154544 2645662 ~ 2660570 (+)
G41591 NA other downstream 345049 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1238112 3734554 ~ 3736035 (+)
G41996 NA other downstream 2626088 5117206 ~ 5124149 (+)
G43896 NA other downstream 3278971 5770089 ~ 5771775 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00011550 nrg2,LOC102784840,LOC100711745,LOC102211978 coding CM030133.1 CM030133.1 30636382 ~ 30637300 (+)