CI01000006_02516145_02524371


Basic Information

Item Value
gene id CI01000006_02516145_02524371
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2516129 ~ 2525809 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02516145_02524371.mRNA
ACAGCTGTGCTTTGTTTCCGTAGACACAGCACAGGTGATTAGTATCGCTCTAAGACACTGTTCTTCTGTACCACATGACAGACACTTTGACGTATATCTGCGACCACAGACAGGATGAAAAAAAAACACCATCTATACAATGTTATGTCTTACACAAGCACAAGCACACTATGTTAAATTACACCTGTGTTAGTATTGGGAGGTCAAGCGTGTCAAACGTCAGAAAGTAGGACCACATAAAAGCTGGGGAACACAATACTCTCTCTTTCAGAGTCCCCCTCAAATCAAGCCTCGGGGCACACAGGGTACGGAACACCATCCTGAAGGGATCAGACACTGAAAGACTTTTACATGTCTGTAAATGAATTAAAAGGTGGGGGGAAGGTGTGGGAGAGAGAAAGACAGCACAATACTATGCCTCCTTGTCCTCACCCGCTAATGTAATTGTAGAGTTTAATATCCAGGTGAATCTACCAAGCACTCAAAATAACTCTGAAGGGACCTGCCATTTGAACTGTAGCAGTTCCTCACCTCAATGTGAGGGAGAAAAAAAAAATCACTTTTTAAACACTTAGTAGTTGTACTTGTGAGTATAAGAAGCGCTATTCTAGTGGTGTAGCTTTTGATTAGCGTATAGGGGGACCCAAGTTCCCAGCCTAATATACAATCTAAACAAAATTTAACTCAAACTGACAGCCAGTGTTAATGCACATTGGTTGGATGGGAAATAGCAGCTTTGGCAAAATCTAATAGCTCCTGTTTTACTGCACTGCTAAACAGTATGTGTTTCAAGTGTGGGCAGATGTGCAAATTATGGCAGAATTTTTGAGGTTCAGAGTAAATTCTAATGGATTTAATATATTTAGACATGTGAATGGGTGACTTCTGTCGCAGCATTTTAAACAAACACATTTTTTTCCATTAATCATGCAACTTAATTATCAGAGAATTGCATTCAATACACCTGACTCAAAACTTTAAGACATATGCCCCTCTGAATGGGCATAACGCTTCTGGGAACAGGAGAAAGACGGGAGTCTTCCATTAGAAGTGTGAATCATCCCATCATAAACTAGCATAGAGGGGTATGTGACCAGGCAATAAGGGATTTGCCTCTCTCCTGCTGTGTCTCCCTCCTCGACCTCAGGGTCAGACTGCAGTGACAAGCTATGACTTGCAGCAGCGCAGACTGAAAGAGAAGGAGCTCACACTCTTCAGCCCCCATTCAAGAAAATCTAAGCCATGACGTTTGAAAGGTTTCACAGCAACGACCATCTCCCTGAAGTGCAATCCAATGGAGAAAATGTGTGGCAGCCACTTGCAGAAGTGTAGAGAGTCAGCACCAGTGCAGAAATAAGAACAAGCCCTTTGCAAGTACTTGAGGAACGGGCTCAATACCATGAGAGGCAGCCCACAATTTGGCTGAATCTCAGTAACAATGCAACTCATTAGGCGAGAATATGCCGAAATCAGAGCAGCAGGAAAGCAGATTGCAGAATCCACACCTCAGCTGATCTGTAACACTGACCCCTGGCTGATCTCTCCCCCACACACTGCTCTACCACCCAGTGTCGTCAGGAATCCCAACAGTGAGCACGCAACCACAGAGTGGAAACCTTGTGAGAGCACAGAAAAAACAAGGCCACAGTGTTACACCTCCAATGCCTACGCAGGAGACTTTAACAAAAGTATCCCATTATCTAAAAACACCCATAAAGGAACCTGTACCTTGATCCCAAAAATAGAGGCATTTCATAATTCCACAGAGCAACGTTTCATCAACATGAAAGGGGGTGATAACTGGCATGTCCCAACGCATCTGACCATGCAGTGCAGGCCTTCATTAGAGAAGATCAAAGGGCCACGTTGTAGGCATAAACAGTGTGTGTGTGAGTGGAAGTGCTTCCCTCATGACAACCTCCTTGTGGTGAGTGAATCTGTCAACAGTAATGACACTGAGCGGGATGTGTGGGTCACCCTCCCCTCGTTGCCAGGCGTGATGGGACTTGTCACCCGACCTGCACTCTCCTCTCTGGCACCTATGTGTGTGTACATATACATGCAAAAGTGTGAGATCTACGGGTATCCAAATACAGGTGATGTTCTTTCAAAGAGGAACTCCCTTAGTTTCTCCTTGAAATGCACTCTCTTCCCATCCGTCTCCCACTCTCTTTCCCTCTCTCTTGGCTCCGAAATATTCCTCTTTTCCTCCATTAAAAAGCATCTGCTGTTTCTCAACTTGGGTTGCCCCAAGGCACTCACTGCTCTGATCGGGTGGATCATAGCAGATAAGTGTAGCCCACCTCCCCCTCTACCAGCCACCCGCAGTACCTGCACACCATCACACATATATACCGCCCCGAGACACTGCTGGCATTTCACAAGCTTGCATGTTTCTCCTAGGGCACGGTATGTGTGTGGGGAGATGGTGGATCTGAGTGGGAGATCATCTGTGAACGATTATAGTGCCCAGGCCTGGTGCCTGGGAGCAGGGCATGTTTCTAATGTTGAACTCCTTAAGGGTCGGAAAAGGGTTGAACCTCTAGTCAATCTCTTTGAAGGTATATCTGATCGAAAAATCACACACATCCGTGATGCTGTCACCATGGAAACCATTCAGAACAAGAGAGGCGATAGAGATAGAGAGAGAGACATTGCACCACATGAAAACAGAGACGTCCATGAGAGTTGTGCTAGCGGCAAGCGTCCTCTGGGGCTCGGCTGGTTAAAAACCAACGGCTTGAGATTTTCTTTCGGAGGGGCCTCAGATAATTTGAGGGGAGAGCTGGTGAGAGATCAAGTGTGTGGCCCCCGGGTACGAGTGGCAGGACGGCCCCTCCATGCTCTGGCTCTTTTGGAGGGAGGGATTACAGGAAACCCGGAGTGCAACTGTGCCGTCTCAGTGCGACAGGCAGACAGCCCGGTCACAGATACGCTCCCTGCTGTTTCAACGACAGCAGCACTGCATGCCAGAAGCGCATTGACTCATTCGGACTCGAAGAACAGTCCCTCATCAGTCATCGTCTTGAACGATTCTTCGCTGTCTGGGCAGAATAATTAAAGTGATTGGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02516145_02524371.mRNA True 3077 mRNA 0.47 11 2516129 2525809

Neighbor

gene id symbol gene type direction distance location
CI01000006_02481958_02482821 PURA, PURAB, PURAA, PURA.L coding downstream 33001 2481395 ~ 2483128 (-)
CI01000006_02448953_02467739 NA coding downstream 48390 2447950 ~ 2467739 (-)
CI01000006_02297635_02343401 PPP3CA, PPP3CB coding downstream 172728 2297082 ~ 2343401 (-)
CI01000006_02285649_02294759 NA coding downstream 219635 2284994 ~ 2296494 (-)
CI01000006_02262424_02271592 DNAJC18 coding downstream 244537 2261937 ~ 2271592 (-)
CI01000006_02617160_02621622 OTUB1, OTUB1A, OTUB1B coding upstream 91321 2617130 ~ 2621622 (-)
CI01000006_02624725_02626124 COX8A coding upstream 98646 2624436 ~ 2626776 (-)
CI01000006_02634636_02643446 SLC22A6L coding upstream 108479 2634288 ~ 2643446 (-)
CI01000006_02648355_02660501 PYGMB, PYGM, PYGMA coding upstream 120599 2646408 ~ 2660801 (-)
CI01000006_02689895_02705309 NA coding upstream 163846 2689655 ~ 2708567 (-)
G42913 NA non-coding downstream 29383 2486225 ~ 2486746 (-)
G42912 NA non-coding downstream 30015 2485899 ~ 2486114 (-)
G42910 NA non-coding downstream 30812 2485096 ~ 2485317 (-)
G42905 NA non-coding downstream 83546 2432033 ~ 2432583 (-)
G42890 NA non-coding downstream 100168 2415741 ~ 2415961 (-)
G42987 NA non-coding upstream 144474 2670283 ~ 2671713 (-)
G42986 NA non-coding upstream 151913 2677722 ~ 2681500 (-)
G43005 NA non-coding upstream 183715 2709524 ~ 2710052 (-)
G43084 NA non-coding upstream 331159 2856968 ~ 2859398 (-)
G42667 NA other downstream 625373 1888988 ~ 1890756 (-)
G42692 NA other downstream 727495 1785501 ~ 1788634 (-)
G42285 NA other downstream 2159990 355813 ~ 356139 (-)
G42934 NA other upstream 43104 2523776 ~ 2582206 (-)
G43102 NA other upstream 382642 2908451 ~ 2933984 (-)
G43549 NA other upstream 1826701 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 2033700 4559509 ~ 4562068 (-)

Expression


Co-expression Network