CI01000006_02531899_02588907 (NRG2A)


Basic Information

Item Value
gene id CI01000006_02531899_02588907
gene name NRG2A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2531816 ~ 2589763 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02531899_02588907.mRNA
GTATAAAGACAAGCTAAGTCTCCCAGCTTAATTCCATTTTCTTCTCAAACATTGATCTTCAATAAAAGCTTTGTGAAAAAAGCATGTTGAACACTGTTGACTTCAAGGGGTTTGATTGGGATTACGTCTGTGATTGCGTGTATTTCGTTGCTTATCCTGCTGCTCCTACACTGAAGCTTATGAAGAATTCTGTGTCAGTGGACGAAGGAAGCAAGCTGATTGTGAAGTGTGAGGCCTCCGGCAACCCCACCCCGGAGTATAAGTGGTACAAAGATGGCGCTGAACTGAGGAAGAGCAAAGAGATCAGAATCAGGAACAGCAAGAGAAACTCCAGAGTTCAGATCGGCAGTGCAAAGCTGGAGGATTCTGGGAATTACACATGTGTGGCAGAGAATAGTCTGGGGAAGGAAAACGGCACCAGTACAGTGCACGTAAAAAGCAGCGCCCCAGAACAAGTCTCACAGTGTCACGGCAGCCAACTTGCGCGCACGCACAGATACGAGGAAGTTGGAGGCAAGACCAAGCCCATGAGAGGTGGTGTGGCCCCAGGCTCGGGGAGGGGCCTGCCCCCAATTCAATCCTCAGAAATTGAGGAGGACACAGACCTTTCATTTATTCCAGTCGCTGACGAGATTGATTTCTTCCTGAGGTCATCAGTAGAACAGCTACTGTTGAGAAAAGCTACGCTGTTTGGGGGCCTGCGGCAGCTCCAATCAAATTGCCGGACTCCCAGGCGAATTTTTGTCACTGCTGCACTGGTGCAGACCCATGATAGCTCTCAGTTCGACACCACAGCACCGTCACCCTTCACTGCCTGCTGCTCCTGTGTGTTTGTCTATACGTCCGTGCTGAAGGTGACTCTGGTTTATCAAAGCATTGTGGAGTCACAGGTCACCGGACGGGTGAAGCGGGACATGAAAAGGGGGCGCTGCTTACAGCCGCAGAGTGAAAGAGTGGGACAGAGGGAAAGCGTGAGTGGGGTGGATTTGCTGCAGCTGGCTGTGACCATCAGAGCTGGTGCAAGAGGGGCAGTGGGCTGGTGCTGCTGTTTCTGGGGGCAGAGCGTTGGGCTTGTATCAGGGACTGGAGGTGAGCGTTTCCCTGTGCCGCAGCCTCCCCCGCGCCGTCCTCCAAGGCCCTGCTGCAGGGGAGCATGCGGAGGAAGAGCCCTGCTCCTCGTGCCCGTTCTGCTGCTTCTGCTACTGGGACTCGGAGCCTGTTTGCTACTGCTCCGCCGAGCTTTGATTCAGGGAGCTGGTCGTAGCAAGGACCCCGACTGGCTGGATCTTCTCAGGGGAGAGGATGAGGAGGAGGGGCTCCGCACAGATGATGCTCCACGGATGCACGGCAGTCCCGTCTCATCCTTTCGATGGTTCCCCGAGTCTCTGCCCACCCTCACCCCGGGCACAGCCTCCTCCGAGCCTACCTCCAGACCGACGAGCACCCTTGCCCATGCCCTCACGCCGCCCAGCAGCTCCCCACCCCCTTTGGTAACCACAACGTTATCTCCGGGTTCGGGCCACGCCAGAAAATGCAACGACACAGAGAAGGCATACTGTGTGAATGGCGGTGACTGTTACTACATACATGCAATGGCCAAATGGTATCCATCAATCCTTTTCTCCTTAAACTCGCTCTCATTCTCTCCATCTATCGCATCTGTCTTCGGTCGTGTCCCTCTTGTGTTGGGGGTACACGTGCTGGAGCGATGTGCATCAAACCATTGTGAAATGCCATGTCATGCTGGTTTAGTGCTGGAACAAATATTTATGAGAGCCAGAGGCCTCCCACAAGACCGCATGTTGCGCTATGTTATGAGTGCACCTGCTGCTATTTGCAGCCCAGATGCACGCCATGCGTCCCTGGAATACTGCTTGGCAAGCAAAGGGCCAGGACATGGCTCCAACAGCCATTCAATAAGTTGTGTACAAACTGGAAGGAGCAATAACTCAATTGCTGCAGCTAATTCACTCACGGGTTTACTTCTACAGCCCAGTTCTGGCAAAAATTCGCTTTTTCTATTTCTCTCTAACCGCCTTTGTAGATTTTCATTAAACAGAGTCTATCGGCTCCTGCTGCCAGTGAGAGAGCGAATGAAAAATGCATGTCCAAAACTGAAGAGGGGGCACATGGGGGTTGAGATCATGTCAAATGTCAGAAGTTTTGACTTCGCATATCAAATCTGCATTTCGACCAACCTGAAAATATCACCACATTGCCGCAATTCTTCAAGCGGCGTACGTTACTTAAAGCATGTCGACGCTCCGGTACAAGGGTACATACCCCAGCTTCTCTCCCTCCTGCGTTTCCCTAAAGACTACAACAGATTGTGGTCTCTCACCATCTCGCTGTTATTCCCAGGATGTCCGGACGGATACTTCGGCCAGCGGTGCTTGCAGACAGAGCCCAAGCGGTTATACATGCCCAAACCTAATAAAAGACAGCAGATCAAGTCTTTGCACGCGTGGATTGTTAGCTTTTCCACAGTCAACAACCAGGCTTCCTTTGCGTACTTTGTAGCGCTGTTCAGTTTGGGAGAGGCAGAGGAGCTCTATCAGAAGAGAGTCCTGACAATCACCGGCATCTGTGTGGCTCTTTTGGTGGTGGGCATAGTCTGTGTGGTGGCCTACTGCAAAACCAATATATCTCCAAAAATGTACCGGCAACTGAGAGAGTCATTAGACACGGAGCAGAGGCACCTTTTCCTGGCAGCCGGCAGTCTTCCAGATCCCACAACTCCTCCACCCGGGCTCATTCCTCCACTCACAGTGGGGACCAGTAAATGCAACAGTCCTGCGTGCATGGAGGCGCGGGCCAGACGTGCCGCACACTGTGGCTTTACTGAGCCCCACCGGCCGGCCCTGCAGTACGGCGACTCTTTCGACTCGCTTGGGGACTCTCCGCATAGCGACAGATGCTCTGGCCCAGCTGAAAGTGTCAGAGAGGGAGTCAGGGTCAAGCGAAGCTTCGCTGCTCCAGATACGCAGTATTTGTATCAAGGCAGAGAGAATCTAGCCCACGGCCAGCTGTATTTACAGTTATCTCTCGCCTGCGAAACGCCCACACCACCATGTAAGGGCCAAAACGGGAGAATTTATACCGTGCCTACCTTCCAGATCACGTCTCCCAACGCCAGCCACGCCATGTCTCTGCCCCCCGCCGCACACGCTCCCTACCCGCCGGAGGAGGACCAGCCGCTGCTGCGACGCTACCAGGTGCCGCTGCACGAGGCGCGGGGCCACGAGCCCTACCGGCAGCAGCAGCGCGGCAGCTACCTGCGAGACAGCACGGGCAGCCTTCCCTCCAGCCCCTACCGGCTGGCTCACGAGGAAGAGTACGAAAGCACCCAGGAGTACCTCTCCTCGATGGAGCAACCAAAGAGAAGCAGTCGGCGTTGGCGCAGGTCCAGACTCAATGGCCACGTAGCGCCACGTGGCTACCAACCGTCCCGAGACTTGGGCTCGCGCAGCTGCCTGTCGGACAGTGATTCGGAAGAGGAGGAAGGTGAGAGCACGCCATTCCTCAGTATGCAGAACATGAACGCCGCCGAGCCCTCCGCCCTCTACAGGCCCGTGCCCGACACGCGGACTTCTCACGCCCAGAGCGGGCGGCACGGGCCTCGTGCCAACACACAGACCAGACTGACGCACTCGCGCTCCAAACTGGACAATGCACCCCACTAGAGAGACCACCACCTATCCACAAAAACCGATCTACTATAGACATGCACCTATAAGAAATATTTTTATTTTATATAACTGACAGATATTATAAACAAATGAAATATTTATTTTCATTTTAGCAAAAGTTGTCTACTAGTTAACAGCAAAGACTTTTTTTATAGGGAAAACTCTATTTATATGTACATTTTGATTTACAGCATAAAAAAGATGTGCCAATTTTTTCACAACTTAAAAAAAAAAAATAGAGTAATATTGTGGTGCCTTTTGCTGTATGCTGATGCCAGAGGGCCAGTGGAGTTTTTTGTAGCCTTTCTTATACGGACGCCTCATTTTTTATACTCGTTTACTCTTTTGTTGTCTCTTTTTGGCCTTTTTTTCTTTCCTTTCCTTTCAAGGTTGTGTTTTTTGGGAGCTGACCCTCATTTGAACTGTGACATCCCCCCTCCACCGTCATGCAATATAAACCACTCTAACATAAGGTGTATGTTTACATGAATTTGATCCACAGAGATGTTTTATGATCATGTTGCTTTGCCAACAGGAAATCAATGACAAATGTAATCTGGGGTTCGGAAAAAAAGTAGTGTGTGTGTGTGAGCGTGTGAATGTGAATGACCAAACGCGAGAGGCCTCGAAATGACTGTGGCTCTGAGAAATATGCTGCTGTTGTCTAGAGTTACGCATGTGGGCACCTGATGTCGTCTTACAGATGCACTGCCTTGACTTGCTTTGCATCCCTACAGGGTAAGGTTTGTCACACGGGAGCCTTCTTTTTCCAAAGGAGATTGTGGGTTAAATGTGAGGGGGCCGTGGGCCGGGCTGTCAGTGCTAATAGCTTTTGACAGATAACAAAGAA

Function

symbol description
nrg2a Predicted to enable signaling receptor binding activity. Acts upstream of or within several processes, including heart trabecula morphogenesis; neural crest cell migration; and skin epidermis development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Is expressed in brain; epidermis; heart; median fin fold; and somite. Orthologous to human NRG2 (neuregulin 2).

NR:

description
neuregulin 2a a1 isoform

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02531899_02588907.mRNA True 4539 mRNA 0.52 24 2531816 2589763

Neighbor

gene id symbol gene type direction distance location
CI01000006_02490349_02491048 NA coding upstream 40698 2490349 ~ 2491118 (+)
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 131865 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 149415 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 255135 2273891 ~ 2276681 (+)
CI01000006_02241091_02259573 NA coding upstream 272177 2241091 ~ 2259639 (+)
CI01000006_02613864_02614742 NA coding downstream 23991 2613754 ~ 2614760 (+)
CI01000006_02616480_02616828 NA coding downstream 26717 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 76186 2665949 ~ 2677215 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 184301 2774064 ~ 2933983 (+)
CI01000006_03016090_03016706 NA coding downstream 425374 3015137 ~ 3017314 (+)
G41461 NA non-coding upstream 85882 2445724 ~ 2445934 (+)
G41457 NA non-coding upstream 88840 2442612 ~ 2442976 (+)
G41453 NA non-coding upstream 94364 2437230 ~ 2437452 (+)
G41452 NA non-coding upstream 95187 2436404 ~ 2436629 (+)
G41449 NA non-coding upstream 100679 2430824 ~ 2431137 (+)
G41423 NA non-coding downstream 20468 2610231 ~ 2626186 (+)
G41482 NA non-coding downstream 42451 2632214 ~ 2632830 (+)
G41433 NA non-coding downstream 44340 2634103 ~ 2644385 (+)
G41488 NA non-coding downstream 110844 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 119763 2709526 ~ 2710015 (+)
G41170 NA other upstream 835995 1692065 ~ 1695821 (+)
G40768 NA other upstream 2038790 488407 ~ 493026 (+)
G40767 NA other upstream 2048481 360009 ~ 484185 (+)
G40772 NA other upstream 2052622 475465 ~ 479194 (+)
G41424 NA other downstream 55899 2645662 ~ 2660570 (+)
G41591 NA other downstream 246404 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1139467 3734554 ~ 3736035 (+)
G41996 NA other downstream 2527443 5117206 ~ 5124149 (+)
G43896 NA other downstream 3180326 5770089 ~ 5771775 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00011552 NA coding CM030133.1 CM030133.1 31196866 ~ 31203698 (+)