CI01000006_02613864_02614742


Basic Information

Item Value
gene id CI01000006_02613864_02614742
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2613754 ~ 2614760 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02613864_02614742.mRNA
GTATAAAAACATGGAACAATAATCCGGATTCGACTCTATAAGAAGAGGCAGGCTCGGAAACACTGCTGCTAGTCACTTTGGCTCCTGTTTGCCAGCACTCCAGAGTAACGATGAAGATCCTGTTTCTTATCCCACTTTGCCTGAGCCTGACTCTCAGCAGCTATGCACAAAAGCCTGAACCCTGCAAGTCTCCACCCTTGCTAGAAGGAGCGCTGACCGCGTTCATTCCAGGGCAACACTTGCGTGTTTTTGAGAAATTCTCCTATGATGCCTATGGACAGAATGTCCGTGTTCTAGCGTCTGGGAAGGAGGACAACCAGACCTTCTTTGTAGACAGGCTTCTGCTCTTTAGAGAGGGGGTCAGCTATGAGATCCACTACCACAACCAAACTTGTATCAAGACTGCATTAAAGGTACCATTCAGACATATTGGGGTTCCCCATGATGCCCATTTCCTGAATCAAATGGTCTTGGGTAGCAGCTCTACACCAGAACAAGGATTGCTTGTCAATAACTGGAATGGAACAGCGGAGGAAACAAAAGGTAATATGTGTCGTTATGCTGCCTGATGATTCACACAGACTGCA

Function

NR:

description
LOC557419 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02613864_02614742.mRNA True 587 mRNA 0.47 4 2613754 2614760

Neighbor

gene id symbol gene type direction distance location
CI01000006_02531899_02588907 NRG2A coding upstream 23991 2531816 ~ 2589763 (+)
CI01000006_02490349_02491048 NA coding upstream 122636 2490349 ~ 2491118 (+)
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 213803 2396468 ~ 2399951 (+)
CI01000006_02374902_02382000 NA coding upstream 231353 2374832 ~ 2382401 (+)
CI01000006_02274089_02276641 NA coding upstream 337073 2273891 ~ 2276681 (+)
CI01000006_02616480_02616828 NA coding downstream 1720 2616480 ~ 2616839 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 51189 2665949 ~ 2677215 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 159304 2774064 ~ 2933983 (+)
CI01000006_03016090_03016706 NA coding downstream 400377 3015137 ~ 3017314 (+)
CI01000006_03102358_03152576 NRXN2A coding downstream 487598 3102358 ~ 3152869 (+)
G41461 NA non-coding upstream 167820 2445724 ~ 2445934 (+)
G41457 NA non-coding upstream 170778 2442612 ~ 2442976 (+)
G41453 NA non-coding upstream 176302 2437230 ~ 2437452 (+)
G41452 NA non-coding upstream 177125 2436404 ~ 2436629 (+)
G41449 NA non-coding upstream 182617 2430824 ~ 2431137 (+)
G41482 NA non-coding downstream 17454 2632214 ~ 2632830 (+)
G41433 NA non-coding downstream 19343 2634103 ~ 2644385 (+)
G41488 NA non-coding downstream 85847 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 94766 2709526 ~ 2710015 (+)
G41570 NA non-coding downstream 122376 2737136 ~ 2744797 (+)
G41170 NA other upstream 917933 1692065 ~ 1695821 (+)
G40768 NA other upstream 2120728 488407 ~ 493026 (+)
G40767 NA other upstream 2130419 360009 ~ 484185 (+)
G40772 NA other upstream 2134560 475465 ~ 479194 (+)
G41424 NA other downstream 30902 2645662 ~ 2660570 (+)
G41591 NA other downstream 221407 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1114470 3734554 ~ 3736035 (+)
G41996 NA other downstream 2502446 5117206 ~ 5124149 (+)
G43896 NA other downstream 3155329 5770089 ~ 5771775 (+)

Expression


Co-expression Network