CI01000006_02665949_02677083 (RASGRP2)


Basic Information

Item Value
gene id CI01000006_02665949_02677083
gene name RASGRP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2665949 ~ 2677215 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_02665949_02677083.mRNA
ACAATGAAGGCGTTCTGAAGGAGACGTTTCTCGTGCGAATGTTTCTCACCATGCATCCCTGGTACCTGTCATCCAGTGACCTAGCCAAGAAACTCTTGCACAAGTACTGGATATCTGAGTTCCCAGCTGAGTTTGACCTGAACCCCGCACTTGCTGAACAGATCCGTGGTCTGAAAGAGCGACTGGAGCAGAATGGAGATGTGAGGCGTAGTCTGCTCATCGACATAGACAGCATCCCATCATACGAATGGCGACGTCAACTGGAAGAGACTGTCCAGAAGAAACGCAAGACCTCTCTTCTTTTTGACCACCTGGATGCTTCTACCCTGGCTGAACACCTTACGTATATGGAGTACAAATCGTTTTGCAAAATTCTGTTCCAGGACTACCACAGTTTCGTGATGCACGGCTGCACGGTGGATAATCCCATTCTGGAGCGTTTCATTACTCTGTTTAACAGTGTTTCCCAGTGGATCCAGATCATGGTTCTCAGTAAGCCTACAGCTCAGCAGAGAGCCACTGTCATCAGTGAATTCATCAAAGTGGCCCAGGTGTTTGATGAATTGGTGGAGCTGGTCACTTCCTCTGGAAACTACAGTCGCTACCGTCAGCGTTTCTCTGAATGTTTGGGATTCCGCTTTCCCATCCTCGGGGTACATTTGAAGGACCTGATTGCTGTCCATGTGGCCCTGCCTGATTGGTTTGACCCAGAGAAGACTAGGGTCAACCTAACCAAGACCCATCAATTGTACGCCATCCTGGAAGAGCTGGCGCTCATTCAGAGCACTCCACCCAGTATAGAAGCCAATTCAGACCTGCTGAATCTGCTTATAGTGTCTTTGGACCAGTACCACTCAGAGGACGAGATATATCAGCTATCTTTACAGAGGGAGCCTCGCAGTATTAAACTATCTAATTCCAGCTCAAAGTCACAGTCACCCCTAATAGAACAGTGGGCATCTTCAGTCAAACCCAAAGCGGATCCAGGCATTATCAACAAGCACATTGAAAAAATGGTGGAGTCAGTGTTCCAAAATTTTGACACTGATAGCGATGGCTACATTTCCCAAGAAGAGTTTGAGATCATCAGGAGCAATTTCCCTTACCTCGGCAAGTTTGATGAACTGGACCAAAACCAGGACTGTAAAATTAGCCGAGAGGAGATGATTGAGTACTTCACAAAGGCAAGCTCCTTACAAAACTGTAAGATGGGTTTTGTTCACACGTTTACAGAGACAAGCAGTATCAAGCCTTCATTTTGTCGGCACTGCTCTCGCTTGGTTTATGGTGCTTGTGCTGTTTTCGCTCAGAATGCAGCAGTGTGTTTTAGGGTGTGTCTGAGGGATGTTGTTATGTTCACAGTTGGTACTTGGGTGTAGACAGTAACCACTTCCTATTTTCTAATTTCCTGTCAAGATCCACCCCAGTACAGAACGTGCTTTCCTTTTTCGTTAGTGTTCTTTTTTTTTTTTTAACCAGTGTTTTCGAAGACATTCAGTGAATGTAATTAA

Function

symbol description
rasgrp2 Predicted to enable calcium ion binding activity and guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within small GTPase mediated signal transduction. Human ortholog(s) of this gene implicated in platelet-type bleeding disorder 18. Orthologous to human RASGRP2 (RAS guanyl releasing protein 2).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process

KEGG:

id description
K12361 RASGRP2; RAS guanyl-releasing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_02665949_02677083.mRNA True 1511 mRNA 0.46 10 2665949 2677215

Neighbor

gene id symbol gene type direction distance location
CI01000006_02616480_02616828 NA coding upstream 49110 2616480 ~ 2616839 (+)
CI01000006_02613864_02614742 NA coding upstream 51189 2613754 ~ 2614760 (+)
CI01000006_02531899_02588907 NRG2A coding upstream 76186 2531816 ~ 2589763 (+)
CI01000006_02490349_02491048 NA coding upstream 174831 2490349 ~ 2491118 (+)
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 265998 2396468 ~ 2399951 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 96849 2774064 ~ 2933983 (+)
CI01000006_03016090_03016706 NA coding downstream 337922 3015137 ~ 3017314 (+)
CI01000006_03102358_03152576 NRXN2A coding downstream 425143 3102358 ~ 3152869 (+)
CI01000006_03164803_03183473 PCNX3 coding downstream 486974 3164189 ~ 3183719 (+)
CI01000006_03232003_03242938 NA coding downstream 554788 3232003 ~ 3243362 (+)
G41433 NA non-coding upstream 21564 2634103 ~ 2644385 (+)
G41482 NA non-coding upstream 33119 2632214 ~ 2632830 (+)
G41423 NA non-coding upstream 39763 2610231 ~ 2626186 (+)
G41461 NA non-coding upstream 220015 2445724 ~ 2445934 (+)
G41457 NA non-coding upstream 222973 2442612 ~ 2442976 (+)
G41488 NA non-coding downstream 23392 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 32311 2709526 ~ 2710015 (+)
G41570 NA non-coding downstream 59921 2737136 ~ 2744797 (+)
G41547 NA non-coding downstream 299479 2976694 ~ 3053920 (+)
G41554 NA non-coding downstream 318555 2995770 ~ 3006315 (+)
G41424 NA other upstream 5379 2645662 ~ 2660570 (+)
G41170 NA other upstream 970128 1692065 ~ 1695821 (+)
G40768 NA other upstream 2172923 488407 ~ 493026 (+)
G40767 NA other upstream 2182614 360009 ~ 484185 (+)
G40772 NA other upstream 2186755 475465 ~ 479194 (+)
G41591 NA other downstream 158952 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1052015 3734554 ~ 3736035 (+)
G41996 NA other downstream 2439991 5117206 ~ 5124149 (+)
G43896 NA other downstream 3092874 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 3431269 6104927 ~ 6109820 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019665 rasgrp2 coding NC_007132.7 CM002905.2 28415888 ~ 28439596 (-)