Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000006_02689895_02705309 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 2689655 ~ 2708567 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| hypothetical protein cypCar_00000867 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000006_02689895_02705309.mRNA | False | 4161 | mRNA | 0.48 | 5 | 2689655 | 2708567 |
| TU48824 | True | 273 | lncRNA | 0.58 | 1 | 2689945 | 2690217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_02648355_02660501 | PYGMB, PYGM, PYGMA | coding | downstream | 28854 | 2646408 ~ 2660801 (-) |
| CI01000006_02634636_02643446 | SLC22A6L | coding | downstream | 46209 | 2634288 ~ 2643446 (-) |
| CI01000006_02624725_02626124 | COX8A | coding | downstream | 62879 | 2624436 ~ 2626776 (-) |
| CI01000006_02617160_02621622 | OTUB1, OTUB1A, OTUB1B | coding | downstream | 68033 | 2617130 ~ 2621622 (-) |
| CI01000006_02516145_02524371 | NA | coding | downstream | 163846 | 2516129 ~ 2525809 (-) |
| CI01000006_02720061_02749853 | NA | coding | upstream | 11400 | 2719967 ~ 2749874 (-) |
| CI01000006_02766733_02767600 | NA | coding | upstream | 57798 | 2766365 ~ 2768738 (-) |
| CI01000006_03018948_03029493 | NA | coding | upstream | 309832 | 3018399 ~ 3031161 (-) |
| CI01000006_03043665_03066360 | NA | coding | upstream | 334671 | 3043238 ~ 3067159 (-) |
| CI01000006_03188826_03200931 | NA | coding | upstream | 480210 | 3188777 ~ 3200931 (-) |
| G42986 | NA | non-coding | downstream | 8155 | 2677722 ~ 2681500 (-) |
| G42987 | NA | non-coding | downstream | 17942 | 2670283 ~ 2671713 (-) |
| G42934 | NA | non-coding | downstream | 109511 | 2523776 ~ 2582206 (-) |
| G42913 | NA | non-coding | downstream | 202909 | 2486225 ~ 2486746 (-) |
| G42912 | NA | non-coding | downstream | 203541 | 2485899 ~ 2486114 (-) |
| G43005 | NA | non-coding | upstream | 957 | 2709524 ~ 2710052 (-) |
| G43084 | NA | non-coding | upstream | 148401 | 2856968 ~ 2859398 (-) |
| G43092 | NA | non-coding | upstream | 175258 | 2883825 ~ 2980614 (-) |
| G43262 | NA | non-coding | upstream | 403944 | 3112511 ~ 3116186 (-) |
| G43264 | NA | non-coding | upstream | 408857 | 3117424 ~ 3118093 (-) |
| CI01000006_02285649_02294759 | NA | other | downstream | 394657 | 2284994 ~ 2296494 (-) |
| G42667 | NA | other | downstream | 798899 | 1888988 ~ 1890756 (-) |
| G42692 | NA | other | downstream | 901021 | 1785501 ~ 1788634 (-) |
| G43102 | NA | other | upstream | 199884 | 2908451 ~ 2933984 (-) |
| G43549 | NA | other | upstream | 1643943 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 1850942 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 4264657 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 4794578 | 7500246 ~ 7507976 (-) |
