CI01000006_03043665_03066360


Basic Information

Item Value
gene id CI01000006_03043665_03066360
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3043238 ~ 3067159 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03043665_03066360.mRNA
ACATGACATACAAGTCTTGCAAAAAACTCCAGAGAAAACCCATATACCAATATGAAGGGACTTCAAATAAATGGGGTCTGTACAAACTATATATATTTCCTTTTAGGCATCTCATATTTAAATACATACATTAAAAAATAAATCCATATAAAATATATCAAGAGAAAAATAGATCAAATAGCTACAAAATAGTGACATGCTGAGTGAAAATAAAAAGTTCGCCTTTGCAGGAAGCAACACTGTTCTCATTTTTTTCTTGCATTTTTTTTAAATTATAAATTATATCACTGAATAACTGTATATTTAAAAATAGTTATACTGAAAATTTAAAAGATACTGCTTCAAGTTTTTTGTTATTAGCTTGTAGCTTTTTCAAAAGAGTTGAAATACTTTAAATTATGAGTAGCTTTTAGCTCGTAGCTTCTGATTCAAAGTAGCTTCCCTAACATTAATGATCAATGCGCATTGGAAATATTTTAACAGACACTAAAATATAAAATAAAACCTTGAGAAAGCTGGTAGAAAAAGACTTGCGTACCATATCAACACACACACACATTACAAGGCTATTTTTCCTCCTTCTCTGAATTTGCCCTACCCAAAAAACAAACAAAATGTCAAGGTAAGGTGAAGTAGTGATATGTAGAACTGAAAAAAAAAACAAGCTATTGACAAACTATGGGAGAGGATGAAAAAATGATGGAGGGAGGGAGGGAAAGCAAGAGAGAGAGCAAAGCTCCTACACTAGCCAATACCTCCGCCTCTCCCCACTCGCTCCCTTGATAAATAACAGACCTGGATGAGAATACAAAAAGAGCTTTCCCCAACAAACTCAATCTCACTTCTGCAGTCTCCAGTGGGATGTACAAGCATTACAGAGCCCTCTGTGCTGCTTAATAGGGGGAGAGGCCTGGCTGGATGTTTGTCTGACAGCTTTTTGGAACGTTTGACTGAGTCTGACTCAGGATTTGAGCAGCGTAATGTCTGCATAACACAGATTGCGTACAAGCAGAGGGTGTTTAATGGACAGCGTCCCCTCATTAGAGCACATCTCCCACTGTTTAGCAGAGCAGGTGCTGGAGATGTACTGTTTATGCCTCGGCACAAGCCTGATGAGGGATCAATGAAGGACGAGAAAGTCTATTATGCTCCAACGCATGAAAGTAGAACATTCGACACAGATGATGTGTCAAGTTTGAGGAAAATCAAAAACCGCCAACCTTCATCCTTCATCAAAAAGCCAGCAAAAACAGATGGGCGAAATCAGATGAAATCAAAAAAACAAGCTACTGTCAATCTCAAGCGATCACATCAGTTCCTGAGAACACATCCCCTCTCCTCAATTGAAGTGGAATCACACTGGAAGCAGGACGCTCTTCTCTCCCAGTCAGAATTGGGCAGGTTTCTTGTTAAAACCCACTCCTCACTTCCTCTCTCATTATCGATGGGGATCTACTCGCCGGCTCACTTTCTCTCTATCAGAGTGACTGGCCCCCTGGAGGCTGACTGCAGCTGCAGGTCTCGTCCTTTGTTTCTTATACGCACTGCGAAAAGGCGCTTTGATCACAGGACTGTTGAACTTGCAGACCATCTGAACCTGTCCCAGTGCATGGAGCAGCAGAACACAGAGCAGATAGATAAAAAGGAAATGGATGAAATAATAATGGCGGCCATAAAATATGCAACACTAATGCGCGAGAGCTGACATGTAGAAACCGGTCTGCGAGTGTGGCTGAAAACGGTGGCTGCATTAGTCACAAGGCTCTCGGGTTCCACCTCCCAAATGCACTCTGGGAGGACTGCCACTGCCTGAAAAGAAATGCATTAAAATAGAATGAGCCTCGGGCTCTCTGTTGAGCAACAATGCTTGTGATCCATGTTTACCTCTCAACACCGCTAATGTATCGGACTGAGATTTGGAGAGATTTCAGATTCTGATTTTAAGCGATGGGTGGTCTGTAGGGCAATTCATGCCACATGACTCAGTGGCTAAGTTAAATCACAGCAGTACGTGCTGTGTGCTGCCAATAACTTTTCATAGTGAGGCGAATGCACAAAACAAACGACAACGGCTGTATGTTTAGCAGTAAGAACATTTTAATCCGAGTCTTTGGCTTCCTCTTGTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03043665_03066360.mRNA True 2132 mRNA 0.41 7 3043238 3067159

Neighbor

gene id symbol gene type direction distance location
CI01000006_03018948_03029493 NA coding downstream 12077 3018399 ~ 3031161 (-)
CI01000006_02766733_02767600 NA coding downstream 274500 2766365 ~ 2768738 (-)
CI01000006_02720061_02749853 NA coding downstream 293364 2719967 ~ 2749874 (-)
CI01000006_02689895_02705309 NA coding downstream 334671 2689655 ~ 2708567 (-)
CI01000006_02648355_02660501 PYGMB, PYGM, PYGMA coding downstream 382437 2646408 ~ 2660801 (-)
CI01000006_03188826_03200931 NA coding upstream 121618 3188777 ~ 3200931 (-)
CI01000006_03205005_03228985 PACS1, PACS1A coding upstream 137837 3204996 ~ 3229508 (-)
CI01000006_03244690_03253311 BBS1 coding upstream 177414 3244573 ~ 3253311 (-)
CI01000006_03256291_03262601 NA coding upstream 188984 3256143 ~ 3262601 (-)
CI01000006_03270739_03288631 NA coding upstream 203206 3270365 ~ 3289514 (-)
G43092 NA non-coding downstream 62624 2883825 ~ 2980614 (-)
G43084 NA non-coding downstream 183840 2856968 ~ 2859398 (-)
G43005 NA non-coding downstream 333186 2709524 ~ 2710052 (-)
G42986 NA non-coding downstream 361738 2677722 ~ 2681500 (-)
G43262 NA non-coding upstream 45352 3112511 ~ 3116186 (-)
G43264 NA non-coding upstream 50265 3117424 ~ 3118093 (-)
G43148 NA non-coding upstream 73791 3140950 ~ 3161767 (-)
G43274 NA non-coding upstream 94911 3162070 ~ 3162300 (-)
G43282 NA non-coding upstream 130717 3197876 ~ 3198222 (-)
G43102 NA other downstream 109254 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 417052 2624436 ~ 2626776 (-)
G42934 NA other downstream 461032 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 748240 2284994 ~ 2296494 (-)
G42667 NA other downstream 1152482 1888988 ~ 1890756 (-)
G43549 NA other upstream 1285351 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 1492350 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 3906065 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 4435986 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 7415697 10453613 ~ 10484006 (-)

Expression


Co-expression Network