CI01000006_03319103_03319306


Basic Information

Item Value
gene id CI01000006_03319103_03319306
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3319103 ~ 3319520 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03319103_03319306.mRNA
GCAATTTTAATATCAGTTTTATTATTGTCGAACTGGGCAGGCGTAACCATCTGCACTAGTGAGGCAGTGGAAAGAGCATTTAAGTACAGGTTTGTGGATTTGTTTGGTACGGATTCTCCTAAATATGTCCATATGCACCACCCTTACTCAAATAGGACTATACGAAATAAGTATGATGTGTATGTGATTGTGGTGCTCATGTAAGCTAAGGGATCAGCCAAACTGTTAACGTTGTGTTCTCATTCGCTCACACACACAGACTTCACACAGGTCCTCTGTATATTCTATCTAAACTACACTGTCTTCCTAGTCGCTGGGAAATTTAACATCAGTCCAAGCCAAATACAATATAGTGAAAACAATTTGGATTAAGGTATTTGACTGAGGCTTGCTCCTCCTTTGCTGAACTATGAATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03319103_03319306.mRNA True 418 mRNA 0.39 1 3319103 3319520

Neighbor

gene id symbol gene type direction distance location
CI01000006_03294091_03298089 SLC29A2 coding upstream 20432 3293988 ~ 3298671 (+)
CI01000006_03232003_03242938 NA coding upstream 75741 3232003 ~ 3243362 (+)
CI01000006_03164803_03183473 PCNX3 coding upstream 135384 3164189 ~ 3183719 (+)
CI01000006_03102358_03152576 NRXN2A coding upstream 166234 3102358 ~ 3152869 (+)
CI01000006_03016090_03016706 NA coding upstream 301789 3015137 ~ 3017314 (+)
CI01000006_03327370_03334117 RIN1A coding downstream 7850 3327370 ~ 3334702 (+)
CI01000006_03350988_03356496 NA coding downstream 31244 3350764 ~ 3357157 (+)
CI01000006_03412397_03437333 MARK2A coding downstream 92877 3412397 ~ 3437710 (+)
CI01000006_03441003_03442001 NA coding downstream 121136 3440656 ~ 3442955 (+)
CI01000006_03446979_03447865 NA coding downstream 127459 3446979 ~ 3447916 (+)
G41520 NA non-coding upstream 3312 3300085 ~ 3315791 (+)
G41513 NA non-coding upstream 30367 3283664 ~ 3288736 (+)
G41502 NA non-coding upstream 42099 3269964 ~ 3277004 (+)
G41543 NA non-coding upstream 55661 3258049 ~ 3263442 (+)
G41614 NA non-coding upstream 69033 3249123 ~ 3250070 (+)
G41506 NA non-coding downstream 19719 3339239 ~ 3344280 (+)
G41526 NA non-coding downstream 38015 3357535 ~ 3359262 (+)
G41542 NA non-coding downstream 43475 3362995 ~ 3365567 (+)
G41566 NA non-coding downstream 129930 3449450 ~ 3455035 (+)
G41519 NA non-coding downstream 212245 3531765 ~ 3533019 (+)
G41591 NA other upstream 479682 2836167 ~ 2839421 (+)
G41424 NA other upstream 658533 2645662 ~ 2660570 (+)
G41170 NA other upstream 1623282 1692065 ~ 1695821 (+)
G40768 NA other upstream 2826077 488407 ~ 493026 (+)
G40767 NA other upstream 2835768 360009 ~ 484185 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 409710 3734554 ~ 3736035 (+)
G41996 NA other downstream 1797686 5117206 ~ 5124149 (+)
G43896 NA other downstream 2450569 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2788964 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2802515 6122035 ~ 6122751 (+)

Expression


Co-expression Network