CI01000006_03808166_03810807


Basic Information

Item Value
gene id CI01000006_03808166_03810807
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3808085 ~ 3810807 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03808166_03810807.mRNA
CTATATAAGAAAAGCTCCTGCTCTGTTCTCTCACGGTCCCCCTTTCAGTTAGAAATCCTTTTTGACACACATTGAGGGAAAATGGATTGTATATTGCTTTTTTCCATCTCAGCTGTGCTGCTGAGTCTCTCTCAAGCATTTCCTGCTACGGTACGAGCTGCAGCTTTCAGCACTGAGCATCTTCACTTCATAATTTACTCACTCACTCACTCTGTATCTGCTCTTTCCACAGATATCCAGTCTGAGATGCACAACGTTATAGATATTTCCTCAAGAATTCTGGAGGCAAACAAAGAGATCAGTGATGTGCTTCTGGAGGGAGATATGGCCTTACCCAAAACAAGGAATGCCATGAAATGCTTGAATGACTACTGCAAATGGCCAAAATCCCCATCTGGACTGGTTGAAGTGCCATACACCATTGCTAACGACTTCTATAGCGATGAGAAGGCAGTGATCGAAAGCGCAATGAAGAGCATCTCTGCAAAAACCTGCGTCAGTTTTGTGCCACGAACCAATCAAGTGGACTACCTCAGCATTGAGAACCTGCTAGGCTGTTGGTCTACTGTAGGGAGATCTGGAGGGAAACAGCAGGTGTCTCTGTCTGTGGACGGCTGTGTTTCTCATGGGATCATTGAGCATGAGCTCATCCATTCTCTGGGATTCCACCACGAGCACACCAGGAGCGACAGAGACCAGTACATCCGGATCAACTGGGACAATATTCCACAAGCATCTGCATACAACTTTCAGAAGAAGGACACAAATAATCTGAATACCCCTTATGACTACAACTCCATCATGCATTATGGAAGGACAGCCTTCGCCATACAATATGGGAAGGAAACCATCACTCCTATTCCTAATCCTTCAGTGCAGATCGGACAGAGGCTGGAAATGTCTAACACTGACATTCAGAGGATCAACAAGCTCTATCAGTGTG

Function

NR:

description
hatching enzyme EHE4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03808166_03810807.mRNA True 943 mRNA 0.45 7 3808085 3810807

Neighbor

gene id symbol gene type direction distance location
CI01000006_03760594_03770397 NXF1 coding upstream 37288 3760275 ~ 3770797 (+)
CI01000006_03744756_03759381 NA coding upstream 48260 3744324 ~ 3759825 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding upstream 72347 3734554 ~ 3736035 (+)
CI01000006_03607868_03614573 LRFN4A coding upstream 193150 3607255 ~ 3614935 (+)
CI01000006_03548703_03554763 PPP1R14BA, PPP1R14B coding upstream 253322 3548703 ~ 3554763 (+)
CI01000006_03837017_03839129 NA coding downstream 26210 3837017 ~ 3839251 (+)
CI01000006_03858455_03862082 RCE1B coding downstream 47648 3858455 ~ 3862368 (+)
CI01000006_03883341_03885377 NA coding downstream 71982 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 76566 3887373 ~ 3891478 (+)
CI01000006_03893432_03940454 ANKHD1 coding downstream 82625 3893432 ~ 3940961 (+)
G41716 NA non-coding upstream 31182 3776605 ~ 3776903 (+)
G41561 NA non-coding upstream 35361 3712733 ~ 3772724 (+)
G41548 NA non-coding upstream 65589 3740194 ~ 3742496 (+)
G41523 NA non-coding upstream 81586 3725866 ~ 3726499 (+)
G41729 NA non-coding downstream 20097 3830904 ~ 3831126 (+)
G41732 NA non-coding downstream 28944 3839751 ~ 3840006 (+)
G41743 NA non-coding downstream 38986 3849793 ~ 3850026 (+)
G41499 NA non-coding downstream 39662 3850469 ~ 3853876 (+)
G41744 NA non-coding downstream 53324 3864131 ~ 3864359 (+)
G41591 NA other upstream 968664 2836167 ~ 2839421 (+)
G41424 NA other upstream 1147515 2645662 ~ 2660570 (+)
G41170 NA other upstream 2112264 1692065 ~ 1695821 (+)
G40768 NA other upstream 3315059 488407 ~ 493026 (+)
G41996 NA other downstream 1306399 5117206 ~ 5124149 (+)
G43896 NA other downstream 1959282 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2297677 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2311228 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3355982 7166778 ~ 7168925 (+)

Expression


Co-expression Network