CI01000006_03837017_03839129


Basic Information

Item Value
gene id CI01000006_03837017_03839129
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3837017 ~ 3839251 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03837017_03839129.mRNA
ACCAATTTGTTGGAAAGGCCCAGTGAGAATATACCCAACCCCTTTGCACATCTAGGAGAAGTGTTCTCCAAGGAACCACAGGTTCCTGATCAGCGCTCGCCTGAGGAATTGGTAACTAAGATGCTGATGTTAGAGTTGGGCTTTTTGGTGAAGCGCACTGAGCGCCTCCGCCAGGAGAGGGCGACGGAGAACCGCAGGCGCAGCTCCTGTGTGGATTACAGCTGGCTGGCTGCTGCTCCACAGAAATCCTCCTATGAGATTCCACCTGGCGAGATACTGGAGCTTCAGGACCTGTGTGCCAAGATCCCTCCCTCCCAATGCGGTCCCCTCATTCTCAGGCTGAGGAAAGTGGTGACAGAGGTAGAGCCAGATGTGACTGAGGTGTCTCGCCTGTTCCGTTCTGTTCTATGCAACTACCTGGATGAGGTGGAGGAGAGGACAGCCAGGGAGAGAGCACCGAAGGCTCGGGCCAAGCGCAGCAAGAGCATGTCTGTCATAAACCTGCGCAAACGGTTACGCATCAACCCGCTCTGGAGCAGGGTCACAGCGGGGCGGGACGGTCAGGACCTATCGGAGGAGGATGAGGAGGATGAAGACAATATTCAAAGGAACAGGAGGATCAGGAGCATGCCTGATATCAGTGTAGTGGAAGAAAGAGCGCCGACCTGAACAGGCTGTGTTTGGAATAGAAAACTCTTTATGACACTGGCAACTAGCTGTTTTTTTCTTTTGCTTCTTTTTCTTTCATTTTACTCAGATTATAGAATTGCTGGTTCCCCAGTTATAATGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03837017_03839129.mRNA True 791 mRNA 0.52 3 3837017 3839251

Neighbor

gene id symbol gene type direction distance location
CI01000006_03808166_03810807 NA coding upstream 26210 3808085 ~ 3810807 (+)
CI01000006_03760594_03770397 NXF1 coding upstream 66220 3760275 ~ 3770797 (+)
CI01000006_03744756_03759381 NA coding upstream 77192 3744324 ~ 3759825 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding upstream 101279 3734554 ~ 3736035 (+)
CI01000006_03607868_03614573 LRFN4A coding upstream 222082 3607255 ~ 3614935 (+)
CI01000006_03858455_03862082 RCE1B coding downstream 19204 3858455 ~ 3862368 (+)
CI01000006_03883341_03885377 NA coding downstream 43538 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 48122 3887373 ~ 3891478 (+)
CI01000006_03893432_03940454 ANKHD1 coding downstream 54181 3893432 ~ 3940961 (+)
CI01000006_03941900_03945253 EIF4EBP3 coding downstream 102048 3941299 ~ 3945701 (+)
G41729 NA non-coding upstream 5891 3830904 ~ 3831126 (+)
G41716 NA non-coding upstream 60114 3776605 ~ 3776903 (+)
G41561 NA non-coding upstream 64293 3712733 ~ 3772724 (+)
G41732 NA non-coding downstream 500 3839751 ~ 3840006 (+)
G41743 NA non-coding downstream 10542 3849793 ~ 3850026 (+)
G41499 NA non-coding downstream 11218 3850469 ~ 3853876 (+)
G41744 NA non-coding downstream 24880 3864131 ~ 3864359 (+)
G41747 NA non-coding downstream 30908 3870159 ~ 3871229 (+)
G41591 NA other upstream 997596 2836167 ~ 2839421 (+)
G41424 NA other upstream 1176447 2645662 ~ 2660570 (+)
G41170 NA other upstream 2141196 1692065 ~ 1695821 (+)
G40768 NA other upstream 3343991 488407 ~ 493026 (+)
G41996 NA other downstream 1277955 5117206 ~ 5124149 (+)
G43896 NA other downstream 1930838 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2269233 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2282784 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3327538 7166778 ~ 7168925 (+)

Expression


Co-expression Network