CI01000006_05196006_05199842


Basic Information

Item Value
gene id CI01000006_05196006_05199842
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5195332 ~ 5200579 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_05196006_05199842.mRNA
ATATATAAACACAATCATGCAGTTTTGTCATTCGTACTACCTTCATGAAATCAACTCCAGGGAGCAACTACATTGGGCAGGTATTGCGGGCCTTACTGTAAACATAGGGCTGCACGATTAATCAAAATAAAAGCAGAATTGTGATTATGGCTTAATGCGTTTATCAAATCACAAAGACTGCAATTTTAATTAAATATATTATATCAATATATAATCGCAATTTTTGGCTAAATTGTGCAGAAGCTAGCACATCAAACCTGGAGTGAAAAATCATTTAAAATAAAGAAAAATCGCAATTCGATTTTATTCCCTAAATTGTGCAGCCAAATATTCTTGGTTCATATTTGACTGAAGTTTTTGATTTTCAGGATTGTTACATTGCTGGTTTAGGATATATTTTTAATACCACAAGCACTAAAAACTTCGCCCCGCAGAAGTCATCATTAAACAAACTGAGGACGATGACAGATCTCCAACAATGCTGTCAAGAGATCTAATTCTGAGCTAGTAACAGAAGAAGAAGAAAAAACGTAAATGGAAGCTTCAGCGCATTTGTTTCAAGGAGAGATTGTAAGAACCCTGTAAGTGGATGGTTCAGGCACCCAGATAAATGCACACACAATTACATAAGTTCCTGTGGCACCTGTCATGAATTCTTAGCATTTGTTGAGAAAATGGCTCCGTCAATTATGTCAATAATGCTTTCTGCTGATTTGTCGGAGATAATTAACAACTCTAAATGCACCCTCAGTCTGCAAAGCACCCAGATGTGTTTGACAAGGGTGCCCGAATATACCTTCACGGATTTAGGTTTTGTGTCTTCAGCGGAGAAACTGTGTGGGACAGGATGTCCTGGACAGGTGCTAAATATCACAACCTTCCACTTCAAAAAGATACAGTTAAGCAAGCATGATTCATATTGTGACACCAGATACATGGCAAAGGAAAAAAAATCAATCCATATTTTGCCAGGGTACAAAAGCACAAAGAACCCTGGGAAGCTCACCCCTGCAGCTCACCCACGGGCCGATGTACCACCCGAGCGTCTTGGTGCCTCTCCAGTTGGGCAGAGGGAGAAAACCGCCACATACAGTAAATAGGTGCTATAGGCCAATGCAAATGGGACAGGTCTTGGACATTCAGCAATATTGGTGTGTTACGGTTTCAAATAATTGCTAACAATTGGCCTTTAAGCATTGATTGTCAGCACTGACAACTTGCACAAAGAGCCACCATGTAGCTGTGATTATCTTCTGTACCTTATTCAGAAGGACCTTTTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAGTACTTTTAGAAAACTAAGGCAGAAAAACAATCTTGCACAGGCGTTTAAACATTTTTAGACAGATCAAACATGTTCGATCTCTGCAACTCCGTTCTGAACTGGCTATAACCAACAAACTCCCCAAAGTATAAGAGCTACAGAAACAAAAATGACTTCAACTACATCAATAATGACAACTGGACTGCTGAAGCTATATTTATAATAATAATATCTGAGATTTCCTGTTATTGAACCCACAGTACTATTTTTCTCCTCGTGCATAGTTATTTTGACAGGTCAATTATTATTAAAAATTATTATTCCATTCAGTACACTGCATATGTGACCATAGACCACAAAACCAGACATAAGGGTCAATTTATTTAAATTGAGAGTTAAACATCATCTGAAAGTTGAATAAATAAGCTTTCCATTGATGTATGTTTGTTAGGCTAGGACAATATTTGGCCGAGATACAACTATTTGAAAATCTGGAATCTGAGGGTGCAAAAAACCAAAATAAATTAAAAAAATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_05196006_05199842.mRNA True 1837 mRNA 0.37 4 5195332 5200579

Neighbor

gene id symbol gene type direction distance location
CI01000006_05169144_05174432 NA coding upstream 20029 5168117 ~ 5175303 (+)
CI01000006_04989318_04992332 SC5D coding upstream 202491 4989318 ~ 4992841 (+)
CI01000006_04931074_04985139 ARHGAP32, ARHGAP32B coding upstream 209159 4931074 ~ 4986173 (+)
CI01000006_04786488_04866122 IGSF9BB, IGSF9B coding upstream 328828 4786425 ~ 4866504 (+)
CI01000006_04776793_04779651 IGSF9BB, IGSF9B coding upstream 415645 4776793 ~ 4779687 (+)
CI01000006_05276965_05313266 NA coding downstream 76177 5276756 ~ 5314230 (+)
CI01000006_05380873_05439031 NA coding downstream 179740 5380319 ~ 5439517 (+)
CI01000006_05469329_05478118 NA coding downstream 268438 5469017 ~ 5478629 (+)
CI01000006_05617900_05693346 NCAM1, NCAM1A coding downstream 417321 5617900 ~ 5693346 (+)
CI01000006_05719079_05723838 NA coding downstream 518500 5719079 ~ 5724165 (+)
G42002 NA non-coding upstream 156021 4969655 ~ 5039311 (+)
CI01000006_04703916_04717922 NA non-coding upstream 477558 4702871 ~ 4718123 (+)
G41970 NA non-coding upstream 494153 4700924 ~ 4701179 (+)
G41969 NA non-coding upstream 499619 4695206 ~ 4695713 (+)
G41965 NA non-coding upstream 508065 4687044 ~ 4687267 (+)
G42181 NA non-coding downstream 111453 5312032 ~ 5312639 (+)
G42183 NA non-coding downstream 114124 5314703 ~ 5314958 (+)
G42197 NA non-coding downstream 139142 5339721 ~ 5339921 (+)
G42217 NA non-coding downstream 191354 5391933 ~ 5392138 (+)
G42220 NA non-coding downstream 194340 5394919 ~ 5395288 (+)
G41996 NA other upstream 71183 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 1459354 3734554 ~ 3736035 (+)
G41591 NA other upstream 2355911 2836167 ~ 2839421 (+)
G41424 NA other upstream 2534762 2645662 ~ 2660570 (+)
G41170 NA other upstream 3499511 1692065 ~ 1695821 (+)
G43896 NA other downstream 569510 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 907905 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 921456 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 1966210 7166778 ~ 7168925 (+)
G44872 NA other downstream 2155773 7356352 ~ 7387884 (+)

Expression


Co-expression Network