CI01000006_06104927_06109730


Basic Information

Item Value
gene id CI01000006_06104927_06109730
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6104927 ~ 6109820 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06104927_06109730.mRNA
CTCTGCAGGATGAGCTGAACAGTATCAACATAGAGGAGCTCAAAGGAGAGATGGGCAGCAGAGGCCCCCCAGGAGAACCTGGTCTAAAGGGTTTCATTGGTGAAAGGGGCCCACTTGGTCCCCCTGGTCCTAAGGGTCCTAAAGGACCCAGCGCAGGCATTGGTGGCATCGTCGCCAGTCAGAAGCCAGCTTTCTCTGTGTTGCGAAAAAGCCAAGATCATGCATCATATGGCCAACCTGTGACCTTTGAAAGTAAACTTAGCAATGTCAATAATGATTTCAACCTTCAAACTGGCTATTTCACTTGCAAGGTTCCGGGTGTGTATTACTTTGTGTTTCATGCATCGTCTGAAGGACACTTGTGTCTCAGACTTAAGAGTGACTCTGCATCTCCAGTCAGCCTAAGTTTCTGCGATCATAACCTACGATCACAATCTCTTGTTGTGTCAGCAAACATGTTTGGTGGACACATCATTTTTGGAACACTTTTAGCTGGTTCTCTCTGCCTCCATCTGGTCTCTACGGACACTTGTAGTGCTGGAGCGATGCCTGGTTTGCCAGGTATCCCTGGATTTCCTGGACGTGATGGAAGGCATGGGATGAAGGGAGAGACAGGAGATCCTGGGATTCCTCTAAAACCTTACGAAACCAGGAAAAAAGGAGAAAAAGGCGAGACTGGACTCAAAGGAATGCCTGGAAAGAGGGGTCTCCGTGGGGATTTTGGCGAAAGGGGACCAAATGGCCCCCAAGGACAGCCAGGGGACCCAGGCAATTTAGAGAATTCCAAATCTCACCTGCAGTCTGCATTCAGTGTGTCCCGTGGTACAAGATTGCCTCCCGAGCCCAATACTGTGATACGCTTCACTAATATTATCACTAATCCCGATGGCCATTTCAAAACTGACGAGAGCAAATTTGTATGTAAAATTCCTGGCACTTATTATTTTGTGTTTCATGCATCGTCCAAAGAAAAAAGTCTGTGTGTAACCCTAATGCATGATGATAAGAAGGTAGCTAATTTCTGTGATCACTTGCAAAGGAGCAGCCAGCAGGCGTTTATCTTCATGACTGCACATGTAGTGCCGCAACTTGCTATCATGTTGTTGCTGGTGGCTTCCTCTGTGTCAGATACATGCGATGGGTACAGGGGTTTCCCTGGAAGACCAGGTATTCCAGGAGTTCACGGTACCGATGGGAAGGATGGCACAAAAGGAGAAAAAGGAGATCCAGGTGACGATGCAGTGCCAGTGATTGGGCCAAAAGGGGACCCTGGAATTCATGGATTCCCAGGCAGGCCTGGTCAGAAGGGGGACAATGGACTGAACGGGTTACCGGGGCCAATGGGACCGAAGGGAGAGAAGGGCGATTTTACAGGGGTTGATGATCCAACCCAGTATTCCGTTTTCTCTAACAAAAAAAGTCCTAGGTCACAGAGAGCTCCTGCAGACACCTTAATCGTCTTTGATATCCCTCTGATCTCCAGGTTAGAGGATGATTTGGAGAGTGTGGGTTACTTCAACGTTACAATAGCTGGAATGTATTACATCAGCTACCACATTTCGTCCTCTCAGTCTGCCTGCCTAAAGATTCAGGTAGGGGAGCAAGAGAAAGTCAGTTTCTGTGATTCACCTGGTATGATGATGGTAACTGCAGGATCTGTGGTACTGCCACTGAAAATAGGTGATAAAGTGTCTATACAGACTACTGCACCAAGCTCTATCTTCAGTAGAGACACTGACTGCACCTTTACAGGCTTCTTGCTCTTCCCAATGAATGCATAAAATGATTTTGAACAGCCACACTATTGTATTTACTCTTCCTCAAATCATAATTTGTAGCCATTGCTTGGGAATATTCAATGTTACTGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06104927_06109730.mRNA False 1871 mRNA 0.47 5 6104927 6109820

Neighbor

gene id symbol gene type direction distance location
CI01000006_06100199_06103495 FBXO40.1 coding upstream 1404 6100199 ~ 6103523 (+)
CI01000006_06095035_06097240 FBXO40.2 coding upstream 7687 6095035 ~ 6097240 (+)
CI01000006_06049283_06057849 TRPC6, TRPC6A, TRPC6B coding upstream 46051 6049283 ~ 6058876 (+)
CI01000006_06038315_06045317 ANGPTL5 coding upstream 59243 6038315 ~ 6045684 (+)
CI01000006_06006532_06022059 POLQ coding upstream 82745 6004802 ~ 6022182 (+)
CI01000006_06111210_06113067 NA coding downstream 1287 6111107 ~ 6113123 (+)
CI01000006_06122278_06122736 NA coding downstream 12259 6122035 ~ 6122751 (+)
CI01000006_06136379_06136891 NA coding downstream 25996 6135816 ~ 6137257 (+)
CI01000006_06142449_06142925 GIG2I coding downstream 32479 6142299 ~ 6143068 (+)
CI01000006_06146799_06148260 NA coding downstream 36909 6146729 ~ 6148405 (+)
G43970 NA non-coding upstream 32221 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 300766 5792917 ~ 5804161 (+)
G43898 NA non-coding upstream 314013 5789421 ~ 5790914 (+)
G43903 NA non-coding upstream 330978 5771881 ~ 5773949 (+)
G43942 NA non-coding upstream 662004 5442465 ~ 5442923 (+)
G43988 NA non-coding downstream 346 6110166 ~ 6110406 (+)
G43990 NA non-coding downstream 10538 6120358 ~ 6120735 (+)
G43908 NA non-coding downstream 42053 6151873 ~ 6154727 (+)
G43904 NA non-coding downstream 84349 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 163118 6272938 ~ 6273227 (+)
G43896 NA other upstream 333152 5770089 ~ 5771775 (+)
G41996 NA other upstream 980778 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2368949 3734554 ~ 3736035 (+)
G41591 NA other upstream 3265506 2836167 ~ 2839421 (+)
G41424 NA other upstream 3444357 2645662 ~ 2660570 (+)
CI01000006_07167131_07168925 NA other downstream 1056969 7166778 ~ 7168925 (+)
G44872 NA other downstream 1246532 7356352 ~ 7387884 (+)
G45178 NA other downstream 1512171 7607604 ~ 7683671 (+)
G45265 NA other downstream 1774047 7883867 ~ 7920355 (+)

Expression


Co-expression Network