CI01000006_06142449_06142925 (GIG2I)


Basic Information

Item Value
gene id CI01000006_06142449_06142925
gene name GIG2I
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6142299 ~ 6143068 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06142449_06142925.mRNA
ATTTATAGACCCGCATTCAGAAGGAAGTGATCATTGTTAGAAGCAACATCAGAGGTAAGGCACCACTTTGTCTTTGTGAAAATGTATTTGTGTATTTTGGTCATTGTGTTCTATTACATTTTTTAAGATTTTATTTGTTTAGGTTCAAACATGTGGGCTGAAGACGACTTGGGTCCAGGTGCTCCACCATGTCTTGAGAGTTACTTAGAACCAGCTGAGGGTAAAGTCTACAGAATGTACCATGGCACATCAAGGGAGGCTGCTCAACAAATCAAAGTCTGTGGCTTCAAACAGTCTTCTAATGGGATGCTTGGGCCTGGTGTCTACCTCAGCCGAGATCTAGAGAAAGCCTCCAGATACCCTCTGGAATTACCTGAGAGCCAGAGAGTGGTTCTGAGAGTGAGGGTCGATGTTGGGAAAGTGATAAAGATTGACTATCAAGGTCACCCACGGCAGAAAACCTGGCATTATCATGGGTATGACACTGCCTGGTGTCCGCCAAAATGTGGAATGGTGCCAAGCGGTCTTGAGGAAGACTGTGTTTGGGATCCAAAACGAATCACAGTCATTGATGAAATATTCCCAAAAATGCAAATATCGTATGGTGCCTTTCGTGTGTGTTCTTAATTGTGCTTTCCCATGAAGTTTGGAATTAACAGTTGTGAAATATTTTTGAAAATTTTATACCAGCTTTTAAATTTAAATTGCTCATGTGCTTTTAAAAGATGATCATATTGTACTACAAATTCTGACCCTGTTGCTGAGTATGA

Function

symbol description
gig2i Predicted to enable NAD+ ADP-ribosyltransferase activity. Acts upstream of or within defense response to virus. Located in cytoplasm. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06142449_06142925.mRNA True 770 mRNA 0.41 1 6142299 6143068

Neighbor

gene id symbol gene type direction distance location
CI01000006_06136379_06136891 NA coding upstream 5042 6135816 ~ 6137257 (+)
CI01000006_06122278_06122736 NA coding upstream 19548 6122035 ~ 6122751 (+)
CI01000006_06111210_06113067 NA coding upstream 29176 6111107 ~ 6113123 (+)
CI01000006_06104927_06109730 NA coding upstream 32479 6104927 ~ 6109820 (+)
CI01000006_06100199_06103495 FBXO40.1 coding upstream 38776 6100199 ~ 6103523 (+)
CI01000006_06146799_06148260 NA coding downstream 3661 6146729 ~ 6148405 (+)
CI01000006_06171151_06179449 PVRL1A coding downstream 28083 6171151 ~ 6181375 (+)
CI01000006_06192438_06193928 NA coding downstream 49370 6192438 ~ 6194004 (+)
CI01000006_06201072_06204390 CFAP53 coding downstream 58004 6201072 ~ 6204695 (+)
CI01000006_06225846_06258303 MYO5B coding downstream 82778 6225846 ~ 6258515 (+)
G43990 NA non-coding upstream 21564 6120358 ~ 6120735 (+)
G43988 NA non-coding upstream 31893 6110166 ~ 6110406 (+)
G43970 NA non-coding upstream 69593 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 338138 5792917 ~ 5804161 (+)
G43898 NA non-coding upstream 351385 5789421 ~ 5790914 (+)
G43908 NA non-coding downstream 8805 6151873 ~ 6154727 (+)
G43904 NA non-coding downstream 51101 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 129870 6272938 ~ 6273227 (+)
G44010 NA non-coding downstream 131937 6275005 ~ 6275234 (+)
G44012 NA non-coding downstream 142580 6285648 ~ 6285875 (+)
G43896 NA other upstream 370524 5770089 ~ 5771775 (+)
G41996 NA other upstream 1018150 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2406321 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 1023721 7166778 ~ 7168925 (+)
G44872 NA other downstream 1213284 7356352 ~ 7387884 (+)
G45178 NA other downstream 1478923 7607604 ~ 7683671 (+)
G45265 NA other downstream 1740799 7883867 ~ 7920355 (+)
G45336 NA other downstream 1876274 8019342 ~ 8021951 (+)

Expression


Co-expression Network