CI01000006_06146799_06148260


Basic Information

Item Value
gene id CI01000006_06146799_06148260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6146729 ~ 6148405 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06146799_06148260.mRNA
ATATTTAAAGTGTGTCTTTTAACTAAATTGGAGTACTCAGTAATGGTTACTTTCCTTTCCTTCGGCAAACATGATTCTTCATGAAGGGGCATATGGATGCTTTACAGGACCAACATTTCTCCATTATGTGTTTATCCTGTGTTTGCATTCCACAGCCTTTACACAACTTCAGATCTTCCCCCTTTGGATCCTGCGGTTGGCTTTTCTGCTTTATGAGACTCTCCAGAGAACTCTCACTGGAGTCTGTGCAATGGGCTATCCCAATCACAGTTCAAACATGTGGGCTGAAGACGACTTGGGTCCAGGTGCTCCACCATGTCTTGAGAGTTACATAGAACCAGCTGAGGGTAAAGTCTACAGAATGTACCATGGCACATCAAGGGAGGCTGCTCAACAAATCAAAGCCTATGGCTTCAAACCGTCTACTAAAGGAAAACTAATGCTTGGGCCTGGTGTCTACCTCAGCCGAGATCTAGAGAAAGCCTCCAGATACCCTCTGGATTTACCTGAGAGCCAGAGAGTGGTTCTGAGAGTGAGGGTCAATGTTGGGAAAGTGATAAAGATTGACTATCAAGGTCACCCACAGCAGAAAACCTGGCATTATCATGGGTATGACACTGCCTGGTGCCCTCCACACTGTGGAATGGTGCCAAGTGGTCTTGAGGAAGACTGTGTTTGGGATCCAAAACGAATCACAGTCATTGATGAAATACGCCCAAAAACGCAAGGAGCGTATGGTGTCTGTGATAAGTATTATTAAGTGTGCATTCCCATGAAGTTTGGAAGTAGGAGTTCTGAAATATTTTTTTGAAAATGTTATACCAACTGTTGAATTTAAACTGTCCATGTGCTTTAAAATAGTGATCATATTGCACTACAAATTCTAACCCTGTTGCTGAGTATGA

Function

NR:

description
interferon-inducible protein Gig2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06146799_06148260.mRNA True 905 mRNA 0.43 2 6146729 6148405

Neighbor

gene id symbol gene type direction distance location
CI01000006_06142449_06142925 GIG2I coding upstream 3661 6142299 ~ 6143068 (+)
CI01000006_06136379_06136891 NA coding upstream 9472 6135816 ~ 6137257 (+)
CI01000006_06122278_06122736 NA coding upstream 23978 6122035 ~ 6122751 (+)
CI01000006_06111210_06113067 NA coding upstream 33606 6111107 ~ 6113123 (+)
CI01000006_06104927_06109730 NA coding upstream 36909 6104927 ~ 6109820 (+)
CI01000006_06171151_06179449 PVRL1A coding downstream 22746 6171151 ~ 6181375 (+)
CI01000006_06192438_06193928 NA coding downstream 44033 6192438 ~ 6194004 (+)
CI01000006_06201072_06204390 CFAP53 coding downstream 52667 6201072 ~ 6204695 (+)
CI01000006_06225846_06258303 MYO5B coding downstream 77441 6225846 ~ 6258515 (+)
CI01000006_06267132_06269409 NA coding downstream 118727 6267132 ~ 6270057 (+)
G43990 NA non-coding upstream 25994 6120358 ~ 6120735 (+)
G43988 NA non-coding upstream 36323 6110166 ~ 6110406 (+)
G43970 NA non-coding upstream 74023 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 342568 5792917 ~ 5804161 (+)
G43898 NA non-coding upstream 355815 5789421 ~ 5790914 (+)
G43908 NA non-coding downstream 3468 6151873 ~ 6154727 (+)
G43904 NA non-coding downstream 45764 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 124533 6272938 ~ 6273227 (+)
G44010 NA non-coding downstream 126600 6275005 ~ 6275234 (+)
G44012 NA non-coding downstream 137243 6285648 ~ 6285875 (+)
G43896 NA other upstream 374954 5770089 ~ 5771775 (+)
G41996 NA other upstream 1022580 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2410751 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 1018384 7166778 ~ 7168925 (+)
G44872 NA other downstream 1207947 7356352 ~ 7387884 (+)
G45178 NA other downstream 1473586 7607604 ~ 7683671 (+)
G45265 NA other downstream 1735462 7883867 ~ 7920355 (+)
G45336 NA other downstream 1870937 8019342 ~ 8021951 (+)

Expression


Co-expression Network