CI01000006_07078406_07080719


Basic Information

Item Value
gene id CI01000006_07078406_07080719
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7076952 ~ 7080930 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07078406_07080719.mRNA
ATATATATAGGATTAATATGTTATTTCAACTCAAAAATGTCTTAAAGCATCCAAAACGAACCTAATTACCAGATTTTCAAATATGTGATACCATTTGTATAGTTGTTTTTACCATATATAGTATGACATATAAACAAATCATAGACTGTCACTGTAATCAAAGTCCTCCCCCTTCCCGAAGGAAATCAGTGGATCATTTTGATTAGAGGAAGGGAAATCAAGCAGATGAAGGATAATGTACAGCCTAGTGTCATGACAAGCATAAATAAATATGACTGATCCATCTGAGGTCACATGACCCAGCCATCATTCTCAGAGGCAAACGCTTGCGCCTGCATTTCACTTTAGATGGGCTCTGAATTGTAATGCACTGGCTCCTTTTATATAACTGTTATTCCGCAATCCCAAATTTTGCACAGTATTGTAACATAAACAGAAATAAATAGCACACTGTATCCCACTTGTTCACTAGTAACGTGATCATTTGTCATGAATCACAAAATACAAGAGAAGAACAACATGTGAGCTCTATTGTTCCATAAGGTTTTCCCTGACATAAAGCGACTGGTATGTATCTCAGTGCAATAAACGTGTGACAGTTTAGCCTATCTCTGTCTTTCTCTCTTTGTCATATACGCACCCTCATATTGTCTTTCTATGTAGGTCTAAATGGACTGAATTACTGCATAAACAACAATGCATGAACCCTTTCTCATGGAAAACCACAGTCTGGTGAGAGAGAGAGATCGTACATGCAGTTTTTATGAGGTTAGCTGTTACAGCTCAAAACCCTTTTCACTCTTAGCAATCAGAGAGGAACCTGCCTTCAATTACAACCAGAAAATGAATCCAACTGAATTCATCACACACTAAAGTAAACTAGAAACCTGCTACAGAAGGTGGTACGAGAGGCAAATATACAGTAAATGATCAAACAAAGATGGGTTTCTCTGAAAAATCCTGCTTCTTTCAATCTGTGTGGAAAGAAACAATACATCTGTGAATTCATGCACTGATTTTTTCCTCTACATACTGCAGATCTGCACAAAGAACACAACAGTACGAACAGACGTGCGGTAAACAGTTGGCAGTATCATGGCTGAGAAAAATGGGAGACTGTAGGTGAGAAAGAGAGAGACGGAGGGAGAAAAATCAAGCTGCTGCAGTATCCCTACACTGTTGAGCCTTGGACTGCGTGACTGACTGGTGTGTGGCGAGAGAGAGAGAGAAGAAGGGAGGGGGGATGGGAAGGATCTCGCTTGGATGAGGAGCAAGCAGTCAGGCAGGCAGCAGCATCATCTCTTTTGTGGCGAGCTGCTGAGGGAACTGGCCGCCTAGAGCCGTGTAGGGTGCTAACTCCTCGCAGGCGCGCACAGCGCCACCGCCTCTCCCGCACTGGCCGCCGCAGGGACAGCCTCCTTCACAGGCGTAGCACCGCTTGTTGCAGCGGCACCATGGCGCAAGCCGCTAAGCAGATCCGCAAGAACAAGGACCTACAGGAGCTCGCAGCCCAAGAGCTGCGAGAGAAGGAGGAGGAGAAGATCAAGAAGAGGAACCGATCGAGAGACCGCAGACGCAAGATACCACCTGACACAGGCTCCATTGTTTGTTGCGTTCCCTCTGTCTGTCATCGGCGTATTACATTACCTAGTGAATGCACATATCAATGCCGTAAGCGTGAACTTTGGCAGAACGTGAGCGTGATGTCTGCACCTGCCTCTGCCGCCCATTCTCATTACAGTTTGTATGATGGAGCTGAAGTGCATTATGGGAGCTCTGCTGCTCTGAGCCCTCTGGCTGCCTACTTACTTACCTTACCTTCCACAAATGTGCATTCGATGATGTATGGTCGCATGCATGCAGATTTTGGGTTTACACGAGAGCAGAGTCAATGTGGCGCAGTGATTGCTATTAAAAATGGCACTTCGTGTCAACAAGGATTGCCGACCCCTGCTCTATTTGGTGTCTTTGTGCTCCAGAAAACATGTCAGTTTCGCTGAGCCCTAAAAGTGTTTTGGATGGTTCGTGGCCTTGTGAGATTTCAGCTGTTGGTAGACAAACAGTTGTGTTGTGATTTTTACACCTCCCTGAGGTGGAGGGCCAGAGAAAAATGATGTCAAGTGCCCACAGTGTGAGACGCAGAAAAAATGGTTGTTTCGATTGGAATATCAGCACTTACAGCATGCTGAACAGTACACTGCATACTGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07078406_07080719.mRNA True 2211 mRNA 0.45 3 7076952 7080930

Neighbor

gene id symbol gene type direction distance location
CI01000006_07072315_07073358 NA coding upstream 3541 7071668 ~ 7073411 (+)
CI01000006_07066344_07070484 FTSJ1 coding upstream 5697 7066344 ~ 7071255 (+)
CI01000006_06987083_06990215 NA coding upstream 86594 6987083 ~ 6990358 (+)
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 114747 6955035 ~ 6962205 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding upstream 163006 6898410 ~ 6913946 (+)
CI01000006_07121418_07160572 ANK1 coding downstream 40239 7121169 ~ 7160825 (+)
CI01000006_07167131_07168925 NA coding downstream 85848 7166778 ~ 7168925 (+)
CI01000006_07194003_07196123 NA coding downstream 112792 7193722 ~ 7196355 (+)
CI01000006_07203185_07207649 NA coding downstream 122255 7203185 ~ 7207660 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 127550 7208480 ~ 7212838 (+)
G44818 NA non-coding upstream 12785 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 13168 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 81575 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 100068 6976398 ~ 6976884 (+)
G44755 NA non-coding upstream 106136 6970504 ~ 6970816 (+)
G44794 NA non-coding downstream 81550 7162480 ~ 7164707 (+)
G44821 NA non-coding downstream 92287 7173217 ~ 7173447 (+)
G44793 NA non-coding downstream 141992 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 233895 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 234281 7315211 ~ 7315553 (+)
CI01000006_06122278_06122736 NA other upstream 948277 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 967364 6104927 ~ 6109820 (+)
G43896 NA other upstream 1305177 5770089 ~ 5771775 (+)
G41996 NA other upstream 1952803 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3340974 3734554 ~ 3736035 (+)
G44872 NA other downstream 275422 7356352 ~ 7387884 (+)
G45178 NA other downstream 541061 7607604 ~ 7683671 (+)
G45265 NA other downstream 802937 7883867 ~ 7920355 (+)
G45336 NA other downstream 938412 8019342 ~ 8021951 (+)

Expression


Co-expression Network