CI01000006_07121418_07160572 (ANK1)


Basic Information

Item Value
gene id CI01000006_07121418_07160572
gene name ANK1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7121169 ~ 7160825 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07121418_07160572.mRNA
ATATTAATGCCAAGTGGGCATGTGTGGCTGTTATCATCAGGGCTCCTCCCCACTGTCTGCAAGCTCCCCTCCATCTCCATTCTGTCTTATTCTCCTCTGCGCATGCACTGTGCAACTGCAGTAGGAGCTCATTAGAGATGAGTGACACTGCAGTATGAAGGGGATTCCAGTCAGACTAGCAGAGCAGAGCCCTCCTATGGCCGAACCAGGCTTCACACTTAGCATCCCTACAAAAGCACACACTGTACCATGTGCCGTTCTCCAATCAGCCTTTACCTCTCCCGGCCTTTTTGTCGGTTTCCTCCACCGCTCTATTTACACACCCTGTTTAATGAGAGCTCCACAGATCTGTACATGTCTCAGTGCTTCGCTGTGTTATTTTTAGGCTGCCTTCCTCTCAGTGAGTCATTTGACAGCACCTCATGTTTTCTCTTGTATTCGCAGAATGGGCTTAACGGGTTGCACTTGGCCTCCAAAGAAGGCCATGTTAAGATGGTGCTGGAGCTGCTGCACAATGGCATTGACTTGGAGACTACCACAAAGAAAGGGAATACTGCCCTTCATATTGCTGCTCTGGCCGGCCAAGAGAAAGTGGTTGCAGAACTGATAAATTATGGTGCCAACGTCAATGCCCAGTCTCAGAAAGGTTTCAGTCCCCTGTACATGGCAGCACAGGAGAACCACTTGGAAGTGGTGAAATATCTACTTGAACATGGAGCCAATCAGAGCCTTCCAACAGAGGATGGCTTTACTCCTTTGGCGGTAGCTCTTCAGCAGGGTCATGAGAATGTGGTGGCCCTCCTGATAAACTATGGCACCAAAGGCAAAGTGCGTCTTCCGGCCCTGCACATTGCGGCACGCAATGACGACACACGCACTGCTGCCGTACTGCTGCAGAACGACCCAAACCCAGACGTCCTCAGCAAAACCGGCTTTACTCCCCTCCACATCGCAGCCCATTATGAGAATCTCAGTGTAGCACAGCTTTTGTTAAACAGAGGAGCCAACGTGAACTTCACGCCGAAGAATGGCATCACTCCATTACATATCGCTTCCAGGAGGGGGAATGTGATTATGGTGCGGCTTCTGTTGGACAGAGGAGCTCAGATAGATGCCAAGACTAAGGATGAGCTGACGCCGCTGCATTGTGCAGCCAGGAACGGTCATGTACGTGTGGTTGAGATCCTGCTAGACCAGGGCGCTCCTATTCAGGCCAAGACCAAGAACGGTCTATCTCCCATCCACATGGCAGCACAGGGCGATCACATGGACTGCGTGAGGCAGCTGCTGCAATACAACGCAGAGATCGATGACATCACCCTCGACCACCTGACCCCGCTGCATGTTGCAGCACACTGTGGGCACCACCGCATGGTCAAGGTGCTGTTGGATAAGGGGGCAAAAGCTAATGCCCGCGCTCTGAATGGATTCACTCCATTGCACATTGCCTGCAAGAAGAACCACATGCGGTCCATGGACCTGCTGCTGAAGCACTCAGCATCTCTGGAGGCCGTGACTGAGTCGGGTCTGACCCCACTTCATGTGGCTGCGTTCATGGGGCATCTCAACATAGTGAAGAGTCTTCTTCAGAGAGGAGCTTCACCCAATGCTTCTAATGTGAAAGTGGAGACCCCTTTGCACATGGCTGCCAGAGCGGGGCACTGTGAGGTGGCTCAGTTCCTGCTACAGAACAATGCGCAGGTGGATGCCAAAGCGAAGGATGATCAAACCCCCTTGCACTGTGCCGCTCGAATGGGACATAAGGAGTTGGTGAAGCTGCTCTTGGAACATAAGGCCAATCCAGACTCGGCCACCACGGCAGGCCACACTCCTTTGCACATCGCTGCCCGCGAGGGACACGCCCAAACCACACGCATCCTGCTCGACGGGAATGCCCAACAAACCAAAATGACCAAGAAAGGATTTACTCCTCTACATGTAGCATGTAAATATGGGAAAGTGGATGTGGCGGAGCTTCTTTTGGAAAGAGGGGCCAATCCAAATGCAGCCGGAAAGAATGGCTTGACCCCTCTGCACGTGGCCGTCCATCACAACAACCTTGATGTAGTCAAGCTGCTGGTCAGCAAGGGCGGCTCTCCGCACAGCACGGCGAGAAACGGCTACACGGCCCTGCATATCGCAGCCAAACAGAACCAACTAGAGGTGGCGAGCAGTCTTCTGCAGTATGGAGCTAATGCCAACGCAGAGTCACTACAGGGCATCACCCCGCTTCACCTGGCGTCACAGGAGGGGCAACCTGACATGGTGGCACTGCTCATTTCCAAGCAGGCCAATGTGAACCTGGGCAATAAGGAAGGGCATGTGGGCATTGCAGACATGCTGGTGAAGCAGGGTGCTTCAGTCTATGCAGCCTCAAGGATGGGCTACACACCATTACATGTGGCGTGCCACTATGGGAACATAAAGATGGTGAAGTTCTTACTTCAGCAGCAAGCACATGTTAACAGCAAGACCAGGTTGGGATACACTCCTTTACATCAAGCAGCCCAGCAGGGTCATACAGACATCGTCACCCTGCTGCTGAAACATGGAGCCCTGCCCAATGAGATCACCACTAATGGGACGTCACCCCTGGGTATCGCTAAGCGGCTAGGCTACATCTCTGTCATTGATGTGCTCAAACTGGTGACTGAGGAATCTGTATCTGTGATCACCACTGAGAAGCATCGCATGAGTTTCCCTGAGACGGTGGATGAAATACTGGATGTGTCGGAAGATGAAGGTGATGAACTTCTCGGGATGGATGGGGCTCGCTATTTGAAGCTGGATGACCTAAAAGACCAGGATGATGATTTTCTGTCCCCCAAGAAAACCCTGAGAGATTTTGAGAGTGGGATGGGCACGACACCTTACTCACCCGCAATTCCCAGAATTCCATGCGTGTCACCTGAAACTGTCATGTTGGACCAGCACACACCTGTCCCTTTGCCAAAGGAGTATGACGAGGACTCTCTAATCCCCAGTAGTCCAGCCACAGAGACCTCAGACAACGTTAGCCCAGTGGCCAGCCCCATCCACACTGGGTTTCTGGTCAGCTTCATGGTGGATGCGAGAGGTGGGTCCATGCGGGGCAGCAGGCATAATGGTCTGCGTGTGATCATCCCGCCACGCACCTGCGCCGCCCCCACACGCATTACCTGCCGTCTGGTCAAACCACAGAAACTCACCACCCCACCTCCTCTAGTGGAGGGAGAGGGACTCGCATCTCGTATTATCTCTCTAGGGCCTTCCAGTATGCAGTTTCTGGGGCCAGTGATAGTGGAGATCCCTCATTTTGCGTCCTTGAGCCGAGGTGATCGGGAACTAGTGGTTCTGCGAAGTGAGAATGGCTCCGTATGGAAAGAACATCGGAATCGCTATGGCGATGATGTTCTAGAGACCATCCTCAATGGAATGGATGAAGATCTGGAAAGTCAGGAGGAGCTGGAGAAGAAAAGAATCCGACGCATAATCTCCACAGACTTTCCTCTTTACTTTGCTGTGGTGTCACGTGTCCAACAGGAGAGTGATCTTATTGGCCCAGAGGGAGGTCAGCTGATAAGTAAGCTGGTGCCCCAGGTCCAGGCCATTTTCCCCGACACGGCGGTCACGAAGAGGGTCCGACTTGGCCTACAGGCCCAGCCAATCCCTGATGAGCTGCTGACTCGGCAATTAGGAAACCAGGCCACATTCAGTCCCGTTGTGACAGTAGAGCCTCGTCGGCGCAAATTCCACCGACCAATTGGGCTGCGTATCCCTTTACCTCCATCTTGGAGGGAGAGTGTACGCGATGCCGGCGAAGGAGACACCACTAGCCTCCGCCTCCTCTGCAGTGTTATTGGTGGCACTGCTCCCGCTCAGTGGGAAGACATCACTGGCACTACCAAGCTCATGTATTCCCACAACTGTGCCAACTTCACCACCAATGTATCAGCAAGGTTCTGGCTGGCGGACTGTCCCCGAACGGCAGAGGCCGTGACCTTCGCCAACCTGCTGTACCGTGAGCTGATGTCAGTTCCATACATGGCCAAATTTGTTGTATTTGCTAAGATGAACGATGCCAGAGAGGGCCGCCTGCGCTGTTACTGCATGACTGATGACAAAATAGACAAAACCCTTGAGTTGCACGAGAACTTCTCCGAGGTGGCCCGCAGCAGGGACATTGAGGTGATGGAGGGGATGCCGCTGCACTTAGAATGTTCTGGTAACCTGGTGCCCGTGAGGAAAGCCACCCAGCAGCCTCGTAGCTTCAGTTTCCAGGCCTTCAGAGACAACCGGCTACCTGTCTCTGTAAAGGTGGTGGGTAGTGATGAGCGGCGGAGAACATTGACCCCTCTTGCCCTAAGAGAGAGGTACAGCGCCCTGAACGAGCCTGGCCTGGCCACTGTAAATGCCATGGAGAGAACCGAGCTAAAGATCGCAGTAATAGCAGAACAGCTGGGACTGAGCTGGACTGAGCTGGCAAGGGAACTGCAGTTCAGTGTGGATGACATTAACCGGATCAGAGTGGAGAATCCCAACTCTCTCTTGGACCAGAGTTCAGCTCTGCTCAACCTGTGGGTTAGCCGAGAGGGCAAGAAGGCCAAGATGGAGAACCTTTATGGAGCTTTGAAGAACATTGACCGCGCAGATATTGTGAAGTCTCTGGAGGCTCAGGCTCCACAGGTGCTTCCCGAGGCTGTGGAGGAAGGAGCCTGCAGACTAGCTGACTCCACTCTGCTTTCCCCTAGTGTCCTCAATGGTTACGGGCTGGTGCAGGAGGAGCTGCTTTCCCCCGCTTCTATGCAGTACAGCCTTCCCTCCCCGCTGGGCGCTGAGCCCTACTGGCAGGAGGTGTCAAGCCTGGAGTGCGCGCCCATCGCCACCACTGAGGAGGACACCATGATGGAGATGTCGGACGTGCAGGTGTGGCCGGCAGGGGTCAGTCCGTCCCTGGTGACCGTCGAGGACTCTTCCCTGGATGGCAGCAGCCGCGCAGACGACTCGGAAGCCAACACGTTGAGCCTGCCCTGCAGCAGTTTGGGGAGGCCCAGCAGCGGAGCCAGCGCGGCCAGCGGCTCCATCATGGAGCTGGAGGAAGAAGAGGAGGAAGAGGAGCTCGAGGAAGACGACATACAGCATGAGCCAGTGTCCGCAAGTGCGGAAAAGGCATGGGCTAGCGGCGCCGTCCCAAAGGCCAACTACAACGGGCAGGCTGGAGGTCAGAGGTCGGAGGGCAAGAGGACAGAGTTGGCGGCAGCGGGCGGCAGTGTGATGGGTTTAACTAGAGGAGGAGGAAAGGGTGGAAAAGGGGCAAGTTCAGAGGAAAAGTTTTCTGTTCTTACAGGGCAACAGCTCTACGCTCAGTTATGCGAGAGAACTGGACTGACCCGAGCACTAGAACACAACGGGGACAGGCTCGGTGCCGGCGCCTTCCAGCCTTACTCACAGGAGAAAGACTCCCTCCACAGCTGGTCTCAACCCAAAGCCAGGCCGACCATGGAGGCCATGATGTCATCGTCCCAGGACCACAATCAGTCGCGTGTAGCACAGGAGGCACTGCTTACACCGGTATGTGATACAGGCCATTCGGAGGTCCTGCGGGGGCGTCTGCTGGGCACTCAGCCCTTTGATAAAGGGCTGGGCTTCTCCCATCAGGAGGGGGAATTACGGGCATGGGACCAGGACAGACGGAAGGCACAGAAGGATGATCCGATAGATCTCACCAGCGATCACCTACATGAAGAGCAGTTCACTGATGAGCATGGGAATGTCGCGACCAAGTTGGGTGTGGATGTGAAGCGGGATGTCCAGACTGTGAAGCGCTCCAGTCTGCGGAGAGTAAAGCACTGAAATAAACACAAACTGTCCTGAAGGTACGGGACAGGAAAAATAATTGGTGCATAAGGATCAACTTAAAACACATGGGGCGAGCTAGCTTTGCTAAACTTGAATGATACAGCCATCAGTTTTATGTTTTAGCTAGAGTGACTTTGCTTCAGGAGCTATTTGTTCATGAAGGATTGCTCTTCCAGGGTTGAACATCCACTGCCAAATCATCCTTCACCTACACACGACTGGACAGAACGAAACATGGAGCGATGGA

Function

symbol description
ank1 Enables cytoskeletal anchor activity; enzyme binding activity; and spectrin binding activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to plasma membrane. Located in cytoplasmic side of plasma membrane and spectrin-associated cytoskeleton. Implicated in anemia; hereditary spherocytosis; and hereditary spherocytosis type 1.

GO: NA

KEGG:

id description
K10380 ANK; ankyrin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07121418_07160572.mRNA True 6085 mRNA 0.54 39 7121169 7160825

Neighbor

gene id symbol gene type direction distance location
CI01000006_07078406_07080719 NA coding upstream 40239 7076952 ~ 7080930 (+)
CI01000006_07072315_07073358 NA coding upstream 47758 7071668 ~ 7073411 (+)
CI01000006_07066344_07070484 FTSJ1 coding upstream 49914 7066344 ~ 7071255 (+)
CI01000006_06987083_06990215 NA coding upstream 130811 6987083 ~ 6990358 (+)
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 158964 6955035 ~ 6962205 (+)
CI01000006_07167131_07168925 NA coding downstream 5953 7166778 ~ 7168925 (+)
CI01000006_07194003_07196123 NA coding downstream 32897 7193722 ~ 7196355 (+)
CI01000006_07203185_07207649 NA coding downstream 42360 7203185 ~ 7207660 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 47655 7208480 ~ 7212838 (+)
CI01000006_07214841_07222648 C6 coding downstream 54016 7214841 ~ 7222817 (+)
G44818 NA non-coding upstream 57002 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 57385 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 125792 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 144285 6976398 ~ 6976884 (+)
G44755 NA non-coding upstream 150353 6970504 ~ 6970816 (+)
G44794 NA non-coding downstream 1655 7162480 ~ 7164707 (+)
G44821 NA non-coding downstream 12392 7173217 ~ 7173447 (+)
G44793 NA non-coding downstream 62097 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 154000 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 154386 7315211 ~ 7315553 (+)
CI01000006_06122278_06122736 NA other upstream 992494 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1011581 6104927 ~ 6109820 (+)
G43896 NA other upstream 1349394 5770089 ~ 5771775 (+)
G41996 NA other upstream 1997020 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3385191 3734554 ~ 3736035 (+)
G44872 NA other downstream 195527 7356352 ~ 7387884 (+)
G45178 NA other downstream 461166 7607604 ~ 7683671 (+)
G45265 NA other downstream 723042 7883867 ~ 7920355 (+)
G45336 NA other downstream 858517 8019342 ~ 8021951 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00020870 LOC102300863 coding CM030127.1 CM030127.1 35446854 ~ 35485425 (-)