CI01000006_07194003_07196123


Basic Information

Item Value
gene id CI01000006_07194003_07196123
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7193722 ~ 7196355 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07194003_07196123.mRNA
CTATATTAGACCTGAAATCTCCACAGGATGGCCAGCTCACTAGACTGATCTCAGCAGGTTAACCACTTACATATTTCAGTCAGTCACACAAAGGTTCATTCTGTTCCATTGCTGTTTTAATTGAGCACCAGGAGTCGCCGCCAGGCCCTGATCCAATTCCTGGGATTGCAAACGGCGTTCTCCAGAACAGATGTTCAGCGACGGTCGACTGCATTCGCCACTGCCCGGACACTTCTCACAGGTGTGGTTGAGAAACGTATGTGTCTGGAGTGACGGGAGCTATGCCCACTGAAAGTACCGACAGAAACTCGACTGATTTGGCTGATGTCCCTCTCAGGAAGCCATCTTCTGTGAATCAATCAGCTGTCGGCTGTGGGATTTCAACTCTGCCTCATGTTTGCTGGGATTTTGAGCTCGGTTTAGCTGTGCTGTTGATGGCCTTGGCTGGGCTTTTGATCTTGGTATTACTGTATTGGGTGCTCCTGCTGCGCCACAGGCTCCGCGTCGCTCAGGCCGGGAATGCTCTGGAATATTTCGGTTTCTACCACATGGCTCAGTATGATCTAAAAGAGCCCAACCTGCCTGTAGTGACCCCTTCTCTTCCCTCCCCACCTCCACCTGTTCTCCACCTCACTCCTCCACCTCCACCGCCGATGTTGTATGTGCCTCCCCCCTTTATCCACACCACCCCACCCAGCCCTCACCCATCATGTGGAGCCGGCTCGGATGCGGAGGTGTACTCACGGATCGGAGTCTTGCGACCCTCGAGACCCTCCAGTGTGAGTCAGACCCAGATGTGTGAATTACAGCACACTGCATCTGTTGTCTTCTCTGAAATGCATATGTCGTTCATGTACAAACATTCTAAGGCCACAAAGTATATCTGAATAATTGATGACTCTCTACCACTTCCCTTTCTGAAAATGTATAATTTAGCATTATAAAACAGCTGCAGGAGGAATATGATAATTGTGGAGCAAAAGTTCACGACCTTTTTATGAACTGAAAACTTGCCATGGATTTTATATTTCACTCAGTAGATTAAAGTGAAATCAAACTTGAATATAACTGGTCTAAATCACATTTTCCATGACATTTAATGTATTCAGATCAATATGA

Function

NR:

description
uncharacterized protein LOC108180727

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07194003_07196123.mRNA True 1119 mRNA 0.48 2 7193722 7196355

Neighbor

gene id symbol gene type direction distance location
CI01000006_07167131_07168925 NA coding upstream 24797 7166778 ~ 7168925 (+)
CI01000006_07121418_07160572 ANK1 coding upstream 32897 7121169 ~ 7160825 (+)
CI01000006_07078406_07080719 NA coding upstream 112792 7076952 ~ 7080930 (+)
CI01000006_07072315_07073358 NA coding upstream 120311 7071668 ~ 7073411 (+)
CI01000006_07066344_07070484 FTSJ1 coding upstream 122467 7066344 ~ 7071255 (+)
CI01000006_07203185_07207649 NA coding downstream 6830 7203185 ~ 7207660 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 12125 7208480 ~ 7212838 (+)
CI01000006_07214841_07222648 C6 coding downstream 18486 7214841 ~ 7222817 (+)
CI01000006_07243073_07247934 GHR coding downstream 46718 7243073 ~ 7248022 (+)
CI01000006_07249033_07250723 NA coding downstream 52083 7248438 ~ 7250895 (+)
G44821 NA non-coding upstream 20275 7173217 ~ 7173447 (+)
G44794 NA non-coding upstream 29015 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 129555 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 129938 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 198345 6992868 ~ 6995377 (+)
G44793 NA non-coding downstream 26567 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 118470 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 118856 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 119366 7315721 ~ 7315980 (+)
G44854 NA non-coding downstream 119816 7316171 ~ 7316492 (+)
CI01000006_06122278_06122736 NA other upstream 1065047 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1084134 6104927 ~ 6109820 (+)
G43896 NA other upstream 1421947 5770089 ~ 5771775 (+)
G41996 NA other upstream 2069573 5117206 ~ 5124149 (+)
G44872 NA other downstream 159997 7356352 ~ 7387884 (+)
G45178 NA other downstream 425636 7607604 ~ 7683671 (+)
G45265 NA other downstream 687512 7883867 ~ 7920355 (+)
G45336 NA other downstream 822987 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 963161 8197881 ~ 8200145 (+)

Expression


Co-expression Network