CI01000006_07203185_07207649


Basic Information

Item Value
gene id CI01000006_07203185_07207649
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7203185 ~ 7207660 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07203185_07207649.mRNA
AATGAAGAACAGGATAAATCAGAAGATTCAACAAACCTTCGCTGCAGAAAGTGCCGCAGATGTCTAATCGACTCAACCTGCCTCCTTAAGGTGGTAACGTCAAGTGAAGCTGCAGCCGCATGCAGTGTGTGGCATTTGAACGTTGAATCTTTGCCAGATTGGATTTTGTCAAGTGTCGGTCAGGTCAATTGGACTGTTGGGAAATTAAACTGCCAGTACTGTGGAGCTCGCTTAGGAGGCTTTAATTTTGTAAATTGCTCCAAATGCACCTGTGGACATGATACAACTGTACATCTCAGTAAAAGTCGTGTTGATGAGGATCTAAAACCTCTAGTTCTTTTGACAAGACCAGGAAGGACTAGAGAACATACTAGAAGGAGGAAACATGAGGTGGAGTCTCTCCCTCAGACAATAAGCTCAGCTCCCTCTCCTTCCTCAACCCTCAACTTCTCCTGTCCTGTATCTCATGTAGTCTCTGCTGAAACTGAATTTGAGGTTGAGTCAAGTGAAGAACCACAGATTCTTGAGAATGTTGAGAGGGGCACAGATGTTTCTTTAACTTCTGAATTGCCACTACAGCTGTATGATTTTCACGAGAGCTCAGAGGAACGGCATGAGGGTTCTGCTTCCCGGAGTAGAACTTCTCTGGACAGAGCAGTGGATCCCGAGGGCGTCAGACTGATGGAGGAGCCACCCAGAAACATCTTACCCAATGTAGAGCCAAAGCTCTCCAAGAGGGAGAAAAACCGCCTGAAAAGCCTAAGAAGGAAGCAGAGGAAGAAGGAACGCTGGATTCAGAGACAGCAGGAGGCAAAAGATCTGGCTATGAAGTGGGACCTAACAGGCAGCGATGATGAAGAGAGAGAGGGGTATACATGTGCCGTGTGTTTAGACATATATTACAGCCCCTACAAGTGCCATCCTTGCAGTCATGTGTTCTGTGAGCCCTGTTTGAGAACTCTGGCCAAGAATCGGCCAAGCAATACCCCGTGTCCCCTCTGTAGGACCCTCATATCCCATGTGCTCTTTCAGGAAGAGCTCAATCAAACTACAAAGACATGTTTCCCAAAAGTATACAGGTCACGACATGAGACCTTTCAGAAGACCAACTATTCGAAATGGCCCCTGCCCAACTGTCCGAAGCGCTTTCGCATCTTTTGGGGTTGGTCATATGTCATTTGCATAAGGTTTCAGAGACACGGAGGCCCTGCCAGTCGCTGGCAGTTTCCCCACAGAGCATTTGGCCTGGATGCGTTGGATTTGGGGGACATGTGGGGTTGGCCATTTGACATTGACTTTGTGATCATCTCTATCTACTCTCTGCACTGGGTGATGGCGTTCATCATCTTCTGTGGCCTCTGCTACTTCCTCCTCATCTAATGAATGGAGGA

Function

NR:

description
Ring finger protein 180

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07203185_07207649.mRNA True 1391 mRNA 0.48 6 7203185 7207660

Neighbor

gene id symbol gene type direction distance location
CI01000006_07194003_07196123 NA coding upstream 6830 7193722 ~ 7196355 (+)
CI01000006_07167131_07168925 NA coding upstream 34260 7166778 ~ 7168925 (+)
CI01000006_07121418_07160572 ANK1 coding upstream 42360 7121169 ~ 7160825 (+)
CI01000006_07078406_07080719 NA coding upstream 122255 7076952 ~ 7080930 (+)
CI01000006_07072315_07073358 NA coding upstream 129774 7071668 ~ 7073411 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 820 7208480 ~ 7212838 (+)
CI01000006_07214841_07222648 C6 coding downstream 7181 7214841 ~ 7222817 (+)
CI01000006_07243073_07247934 GHR coding downstream 35413 7243073 ~ 7248022 (+)
CI01000006_07249033_07250723 NA coding downstream 40778 7248438 ~ 7250895 (+)
CI01000006_07254728_07260352 NA coding downstream 46601 7254261 ~ 7260434 (+)
G44821 NA non-coding upstream 29738 7173217 ~ 7173447 (+)
G44794 NA non-coding upstream 38478 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 139018 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 139401 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 207808 6992868 ~ 6995377 (+)
G44793 NA non-coding downstream 15262 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 107165 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 107551 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 108061 7315721 ~ 7315980 (+)
G44854 NA non-coding downstream 108511 7316171 ~ 7316492 (+)
CI01000006_06122278_06122736 NA other upstream 1074510 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1093597 6104927 ~ 6109820 (+)
G43896 NA other upstream 1431410 5770089 ~ 5771775 (+)
G41996 NA other upstream 2079036 5117206 ~ 5124149 (+)
G44872 NA other downstream 148692 7356352 ~ 7387884 (+)
G45178 NA other downstream 414331 7607604 ~ 7683671 (+)
G45265 NA other downstream 676207 7883867 ~ 7920355 (+)
G45336 NA other downstream 811682 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 951856 8197881 ~ 8200145 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location