CI01000006_07500281_07507754


Basic Information

Item Value
gene id CI01000006_07500281_07507754
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7500246 ~ 7507976 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07500281_07507754.mRNA
AGAGACTCATCATGGCTCATATTTCCATGTTATATCCCAGAACCCTAATGTGTTGATGGGTTTAGTCTCAATGCTCTCACGTTGAAGCTCATGCTGAAAGAATATGATTGACTTTGAGATGTGAGAGAACCCAAAACAGTTGTGTTTGTCCCACAGGAGAGGGACTGCAGTGTCTTGTGTGAACCAAACTCTATCTGACCACTTCCTTACAGATGACCAGTGATGGCCACAGCATCAGACTCAGCGGACGACGCAGTGGATCCAGTCGTGTCTAAACACACTTCGAGGATAACACTGTCTATTGTCCTGGTGACCATCATTATATTGACTGCGCTTGGTAATTTGCTTGTGATGGTGGCTCTCTGTAAAGACAGACAGCTAAGAAAGAAGAAGACCAACTTCTTCATCGTATCCCTGGCATTTGCAGACCTTCTAGTTGCCCTTGTTGTGATGCCCCTGGCAGCCATAGAGTTGACCACAGGTCAATGGAGTTATGGAGAGACGTTCTGCTTGATCCGTACCTCACTGGACGTGCTGCTAACCACAGCATCTATTCTGCATCTGTGCTGCATTGCACTAGACAGGTACTATGCGATTTGCTGTCAGCCTCTGGTCTACAATAACAAGATGACACCTGTGAGAGTCTCAATGATGCTGGTTGGATGTTGGGTCATCCCCTTTTTCATCTCCTTCCTTCCCATCATGCAAAGCTGGAATACCATTGGAATCGAGAGCTTTGTAAATTGTCATTTCTTCAAAACCGAAGATACAGCGACAATTCCAACCGATTTCTGTCGAGTGAGCTGGAATCACAGGAGTCTGTTGGTGCATCATAGCCAAGATTTCAGAAGCCTACAAATGCAGTTTGATGAGAACATACAGATAACCGCCTACATATGTGTCAAATCAAGAGACTTCATTGCAGTTTGATTTTTGATGGGTTTTCACCTTCAGTGATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07500281_07507754.mRNA False 965 mRNA 0.45 5 7500246 7507976

Neighbor

gene id symbol gene type direction distance location
CI01000006_07463938_07471236 PDE6B coding downstream 27784 7463190 ~ 7472462 (-)
CI01000006_07456715_07457332 HSPB11 coding downstream 42867 7456463 ~ 7457379 (-)
CI01000006_07449425_07454936 NA coding downstream 44940 7449425 ~ 7455306 (-)
CI01000006_07444688_07448103 NA coding downstream 52143 7444589 ~ 7448103 (-)
CI01000006_07358910_07359982 NA coding downstream 139794 7358352 ~ 7360452 (-)
CI01000006_07522441_07525197 NA coding upstream 13073 7521049 ~ 7525813 (-)
CI01000006_07586562_07627355 NA coding upstream 77046 7585022 ~ 7628448 (-)
CI01000006_07636757_07648169 NA coding upstream 128717 7636693 ~ 7649325 (-)
CI01000006_07658119_07685010 NA coding upstream 149192 7657168 ~ 7686169 (-)
CI01000006_07731668_07752706 CCDC80L2 coding upstream 223684 7731660 ~ 7754105 (-)
G45811 NA non-coding downstream 27270 7472582 ~ 7472976 (-)
G45078 NA non-coding downstream 94799 7405149 ~ 7405447 (-)
G45077 NA non-coding downstream 95193 7404784 ~ 7405053 (-)
CI01000006_07312005_07327873 EFNA5A non-coding downstream 173655 7311793 ~ 7327901 (-)
G45055 NA non-coding downstream 174568 7325453 ~ 7325678 (-)
G45841 NA non-coding upstream 34612 7542588 ~ 7542802 (-)
G45848 NA non-coding upstream 49088 7557064 ~ 7557299 (-)
G45849 NA non-coding upstream 50126 7558102 ~ 7558322 (-)
G45852 NA non-coding upstream 55337 7563313 ~ 7563719 (-)
CI01000006_06974359_06976736 NA other downstream 523374 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 2938178 4559509 ~ 4562068 (-)
G43549 NA other downstream 3144818 4352510 ~ 4355428 (-)
G43102 NA other downstream 4566262 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 4874060 2624436 ~ 2626776 (-)
CI01000006_10453630_10483241 NA other upstream 2974880 10453613 ~ 10484006 (-)
G47658 NA other upstream 3522935 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 4142387 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 4826433 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 4842783 12569205 ~ 12582487 (-)
G45828 NA non-coding downstream 1212 7501585 ~ 7501933 (-)

Expression


Co-expression Network