CI01000006_07929484_07931926


Basic Information

Item Value
gene id CI01000006_07929484_07931926
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7929217 ~ 7931926 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07929484_07931926.mRNA
CTGCGATTCACACATTTATAAGGTTGGCGCAGCAGGAGACTGCAGCCGTGCGTTCTACTTTGAAGCATCTGCTTTGCTTCTGAAGAGTTTGATTAAAAAGTTCACATTGCAAATTCATCAGTTTGTTTTTGTTGAATCTGTAACCGCCTTTAAAATCTCTGTTCCAGCTTGCTCTGAGGTGTCCATTATTGGAGGCAACGATGTCAAAAAACTTAAATCGTGGATGGTGTCCATTCAGAAGGACCAGAGACATGTGTGTGGGGGAATCCTCATTCAAAGCCAATGGGTTTTAACTTCAGCACAATGCGAAGAAAAACCCATTACATCTGTGACAGTTCTCATAGGATCTCTGTCTCTGAGTAAAGTGAGTAAAGGCTCTCAGCGCGTTGGCATCCTCAGTTATGACAAACCTAAAACATTCAATGCAAGGACTAAACAAGATGACATTATGCTCATTAAGCTAAACAAAAAAGTGAAAGCAAAACCCAAAAAAATCCCTAAAAAGGAAAAAGATGTTCCACCTGGAACAAAATGTGTTGTGACAGGTTGGGGAACTATCAATTCTAATGTCTTGGAACCTTCTGATAAACTGCAAATGTTAGAGGTGACAGTTGTGGACAGAGATCAGTGCAACCGTGACTACAAGAGAGATATTGTGATCACCAAAGACATGATGTGTGCAGGAAACAAGCAGGAAAAGAAAGGCACCTGTTGGGGAGATTCCGGTGGTCCTCTGGAATGTAAGAAAAACATTGTTGGAATGGTATCAGGGTCGAGAGGATGCGCTAATCCCAAGCAACCAACTGTGTACACATTTCTCTCCAAAAAACACATCTCCTGGATCAATAGCATACTGAAAAAGCAATTCAACAGCACAACTTTTTAAGAACCTAAACATTTCCAGCATATATACTGTTGTTTGTAGTTCAGATTGCTGTAACTTTTAAAATGTTATGCTTTTGGAATTAGGGTTAAATATATATTCATAAAGCAATACCAAACTTTTTTCACATTTTTTTTTTTTAATTAATAAATAAAGCAAAACAGAGCTAAATTAAAATCATGTAAATGTATATGATATTCCATTAATATTCAATGAAGATTTTCCACTGTGCTTTATTATTGATGGACACTCTTGTTATGGTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07929484_07931926.mRNA True 1153 mRNA 0.37 5 7929217 7931926

Neighbor

gene id symbol gene type direction distance location
CI01000006_07879567_07902271 RAI14 coding downstream 26946 7879528 ~ 7902271 (-)
CI01000006_07836338_07852081 FGF10A coding downstream 77136 7835618 ~ 7852081 (-)
CI01000006_07731668_07752706 CCDC80L2 coding downstream 175112 7731660 ~ 7754105 (-)
CI01000006_07658119_07685010 NA coding downstream 243048 7657168 ~ 7686169 (-)
CI01000006_07636757_07648169 NA coding downstream 279892 7636693 ~ 7649325 (-)
CI01000006_07942201_07958652 SLC45A2 coding upstream 10251 7942177 ~ 7958652 (-)
CI01000006_07960990_07974726 AMACR coding upstream 29034 7960960 ~ 7975623 (-)
CI01000006_07997158_07999906 NA coding upstream 63498 7995424 ~ 8000113 (-)
CI01000006_08002867_08008150 HPSE coding upstream 70696 8002622 ~ 8008200 (-)
CI01000006_08009529_08018597 HELQ coding upstream 77603 8009529 ~ 8018597 (-)
G45928 NA non-coding downstream 96621 7831145 ~ 7832596 (-)
G45903 NA non-coding downstream 126468 7802534 ~ 7802749 (-)
G45902 NA non-coding downstream 129096 7799869 ~ 7800121 (-)
G45868 NA non-coding downstream 132593 7791970 ~ 7796624 (-)
G45870 NA non-coding downstream 168044 7755114 ~ 7761173 (-)
G45970 NA non-coding upstream 107754 8039680 ~ 8039949 (-)
G45985 NA non-coding upstream 147542 8079468 ~ 8079696 (-)
G45986 NA non-coding upstream 148092 8080018 ~ 8080256 (-)
G46018 NA non-coding upstream 266306 8198232 ~ 8276329 (-)
G46106 NA non-coding upstream 477036 8408962 ~ 8835381 (-)
CI01000006_07500281_07507754 NA other downstream 418261 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 952345 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 3367149 4559509 ~ 4562068 (-)
G43549 NA other downstream 3573789 4352510 ~ 4355428 (-)
G43102 NA other downstream 4995233 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 2550930 10453613 ~ 10484006 (-)
G47658 NA other upstream 3098985 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 3718437 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 4402483 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 4418833 12569205 ~ 12582487 (-)

Expression


Co-expression Network