CI01000006_08080632_08085336


Basic Information

Item Value
gene id CI01000006_08080632_08085336
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8080393 ~ 8085863 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08080632_08085336.mRNA
AACAAACACACACGCCTCCCTGTGAGGTTCAGTTCTGAGGGAGACGGGATTGTCATACTGGGTATTCAAATAGACTTCCCAAGCCCCTCCATTTGAAAACTCACTTTGATGTAAATTTGTGGACGGATGTTCATCACTTGAGCATCGTCTTAAGCAAACATCAGAGGACATTTTCGTCTCTGAGCAAACATCACAGAGCCTTTTATGTCCTCAAATAGGGCAGTTAATTTATCTACAGATGTCAAAAGCGGGTCATATTTGAATCCCAAGACGCACGTGACATAAAAATGAATTGAAAATATATTTGAACACAAGCATAACATTGTAAGCAAGATATTTACATGCCCCAGAGAGAACTGTGTCGCTGTCCAAAAATAGCACTGGACAATAATCGTCCACTTGCCAGAGATGTGTTCATTTTGTACATTTGTTTATTATGTATTCGGGACGAAATGTGCCATGTTGATTATTGTGGAAGTACGACGAGCATCTAAGAGCGTGTTTACTCAGCGTGGCCATTGAAGATCATGGACTTTGATGAGGATGATAATTTCTCAGGGGGGGTGTACTTCTCCGGGAATCATAAAAACACTCAATGGGAACACTTTCAAACGGAGGTCTTAACTTCACCCCGCTGGGTCGGACCCCGAGACTTCTCATTAACCGTGTCATCAAAGGCCTCCGGCCCAAGTAATCATAACATTAGCGTTGACATTACCACACAGCTACAAGCTTCTTTCGAGCGCTCCACAAACATGCCTGCGCCGGCTGAGTCATTCCTCCGCAGCGAGGGAGCTTGGGCTGAAGCAAACTACGCTAGCCTGGACCCTGCACGCTTCATCGAGAATACAAACACTTACATGACTGTGGACAAGCACGTAGCACCGTTTTCTGAAAGCGCTAAGAGGTCGATGGGGTTCTTGTGTTCGTACCTTGCTTTTAAGCCATCAGACACCCCCATGGGGCACATGAGGAAGATATATCTCTGTCACCGTCCCTGGATTGCGCCAAGGAAGGACATCACAGAGAGATGGAGAGAACAAGAAAAGGTTATGGCCAGCTCGGCTCACGCTGCTCAGAAAGTCTTTACACATGTTTTCTTCGGTCCCGGAAGACGTCGACTGGAGTTTGATTTGAAAGACAAACCCCTGCTCTCAACAGGCTCGTCATTGTTCCCTTTGAAAAAGCGGCTCTCCGCTTGCAACTATCAAACGACTTTTTAAAAGGTAATTAAACAGCAGGTCTCCTCCGCCGAGGGGCCGATGAGTTTCACTTCATTAGCATCACTGTGTATATTAACTCTTTGTGCTGCACAATTATGGAATTATGGACTGCCATATATGACGGTCTATGGCTGCTCTGTGAGGGAAAATGGTAATCTGCTAAACACCTCGATTATTTGTTATTCATAGTCTGATTAATGATTTTTTTTTTTTTTTTTTTGAGGGCCACTGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08080632_08085336.mRNA True 1462 mRNA 0.45 4 8080393 8085863

Neighbor

gene id symbol gene type direction distance location
CI01000006_08020880_08024499 FAM175A coding downstream 55894 8020697 ~ 8024499 (-)
CI01000006_08009529_08018597 HELQ coding downstream 61796 8009529 ~ 8018597 (-)
CI01000006_08002867_08008150 HPSE coding downstream 72193 8002622 ~ 8008200 (-)
CI01000006_07997158_07999906 NA coding downstream 80280 7995424 ~ 8000113 (-)
CI01000006_07960990_07974726 AMACR coding downstream 104770 7960960 ~ 7975623 (-)
CI01000006_08149223_08150992 NKX6.1, NKX6-1 coding upstream 62630 8148493 ~ 8150992 (-)
CI01000006_08153453_08156753 RPL17P7, RPL17P6, RL17, RPL17.L, RPL17.S, RPL17, RPL17-C18ORF32, RPL17-PS9 coding upstream 67579 8153442 ~ 8157606 (-)
CI01000006_08194421_08196816 NA coding upstream 108268 8194131 ~ 8196885 (-)
CI01000006_08207762_08211601 CRKL coding upstream 120808 8206671 ~ 8212202 (-)
CI01000006_08225810_08227168 NA coding upstream 139828 8225691 ~ 8227168 (-)
G45986 NA non-coding downstream 137 8080018 ~ 8080256 (-)
G45985 NA non-coding downstream 697 8079468 ~ 8079696 (-)
G45970 NA non-coding downstream 40444 8039680 ~ 8039949 (-)
G45960 NA non-coding downstream 149699 7930402 ~ 7930694 (-)
G45928 NA non-coding downstream 247797 7831145 ~ 7832596 (-)
G46018 NA non-coding upstream 112369 8198232 ~ 8276329 (-)
G46106 NA non-coding upstream 323099 8408962 ~ 8835381 (-)
G46089 NA non-coding upstream 395386 8481249 ~ 8498802 (-)
G46199 NA non-coding upstream 890808 8976671 ~ 8976871 (-)
G46102 NA non-coding upstream 913230 8999093 ~ 9008209 (-)
CI01000006_07500281_07507754 NA other downstream 569437 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 1103521 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 3518325 4559509 ~ 4562068 (-)
G43549 NA other downstream 3724965 4352510 ~ 4355428 (-)
G43102 NA other downstream 5146409 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 2396993 10453613 ~ 10484006 (-)
G47658 NA other upstream 2945048 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 3564500 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 4248546 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 4264896 12569205 ~ 12582487 (-)

Expression


Co-expression Network