CI01000006_08108713_08122179


Basic Information

Item Value
gene id CI01000006_08108713_08122179
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8108563 ~ 8122364 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08108713_08122179.mRNA
GTATTTAGAGCCTGTCAAGTTAATTTGCAATCCAATGTAATATTACAAACACCAGTGAATATAAAAAAAAATAAAAAAAAAGTTACTTTTGTACTTTTGTGATACGTGCAACATGCGCCTCAAAATGGATGCTTTAAATGTGACAACATCATGGCATCTGTGATATGTGTTCCACTTGAAGTGTTCTCTTCACATAATACGGTTTTAATTGTCTTTCAATTCTCCTTGCGCAGAAGAATGCAAACCATGAGTAGTTTTGCGGTAATGAAGCTGCTTTTAATGGGATTCCAAAAAAGCCCCCATATCATCAAAGTATACATGCACGCTAATTTGGTTAAAAATAATTCAGACCAAAGACAATCACACACTAGAAAGACACTAGATTTGTCCTCTAAGAAAGAGGACCCTAATTTCAACCTTGGGCAGTGGCTTCCTTATTTGAGTGGGGAGGAAAATATCATTACCTATTTCAGTGTGATTAAGGCAGAATGCCACCTGGCCAAATGCAAAGTGATTAACTTGAACGTCCTCCACAGCCTTATAAATGCAAATTTGGCAGATATTGGTAGAGACAGTAGAGATGACATATGTTTTTTCGCTGCCGCCCAGTTATTCTGTGATCACATCCTGCTTGGGAATTGTTCATCCGTTCACTCGGCTTTTGTGGCCGATTTCATGCCATGGTATGTGCGCCCAGTGCAGCTGGAGAATGCAGTTCCAGTCTGGCATAGTTCCTGGACCGTAGATCAAGGCAGAAGACTGGAAAGTGTGCAGAAACAGGTCTGTAAAATTATACTGGCGTATTCTGATGCTCTTGGCCACCTTGGACTGTGTACCCTTATGGAAAGACGAACTCAATTGTGTCTTGATTTTGCTAGAAAGTTATATAAGTCTAGTTTCAAAGACTGGATATGCCCTCTTAGGGCAGCAGCATTGTGGTGTGCTGTTGAAAAGGGAGAAGCCATGCTTGAGCTGATGGGGGCTGGGTCAGAGGAAGAAGCAACAAATGCCCGGAGAATCCCCATTAATATTCCCATTGTCACCCCACAGAGGGAGGTCTTCATGAACAAAGCAAGCTCATTTATCGGGCAGCAGGCAAGTCGACCATGGCAAAACCAGAACAAAGCAAAAAGTCAATTCAGCTTGAATGAAACCTGAGGTAACAAAGAAAAATCATGTCATTTTGAGAGAAAGAGAGAGAGAGAGTGAGAGGGTCTGTATACAGAGAGGCTATAGCAGGATTTGATATAGCATGGTTATGCTTGAAATCGACTCTAAAGCACAGCCTGCTTGTGTCAAGCCATTGCTCAAAGATCAATACTTGTTCAGTACAAACATACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08108713_08122179.mRNA True 1343 mRNA 0.41 7 8108563 8122364

Neighbor

gene id symbol gene type direction distance location
CI01000006_08025159_08032131 NA coding upstream 75940 8025159 ~ 8032623 (+)
CI01000006_07939608_07940846 RXFP3 coding upstream 167148 7939318 ~ 7941415 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 313305 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 381566 7699736 ~ 7726997 (+)
CI01000006_07694812_07698078 ERI1 coding upstream 410129 7694812 ~ 7698434 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 62435 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 75833 8197881 ~ 8200145 (+)
CI01000006_08222787_08225568 MED15 coding downstream 100423 8222787 ~ 8225568 (+)
CI01000006_08305571_08341681 NA coding downstream 183207 8305571 ~ 8341681 (+)
CI01000006_08366730_08400944 NA coding downstream 243726 8366090 ~ 8402325 (+)
G45346 NA non-coding upstream 39319 8069032 ~ 8069244 (+)
G45313 NA non-coding upstream 100284 8007722 ~ 8008279 (+)
G45316 NA non-coding upstream 103011 8004311 ~ 8005552 (+)
G45325 NA non-coding upstream 114346 7993852 ~ 7994217 (+)
G45322 NA non-coding upstream 115698 7992633 ~ 7992865 (+)
G45381 NA non-coding downstream 10843 8133207 ~ 8146080 (+)
G45356 NA non-coding downstream 32432 8154796 ~ 8157535 (+)
G45391 NA non-coding downstream 36272 8158636 ~ 8158893 (+)
G45392 NA non-coding downstream 36881 8159245 ~ 8159467 (+)
G45359 NA non-coding downstream 112374 8234738 ~ 8238406 (+)
G45336 NA other upstream 86612 8019342 ~ 8021951 (+)
G45265 NA other upstream 188208 7883867 ~ 7920355 (+)
G45178 NA other upstream 424892 7607604 ~ 7683671 (+)
G44872 NA other upstream 720679 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 938029 7166778 ~ 7168925 (+)
G45355 NA other downstream 87191 8209555 ~ 8212388 (+)
G45416 NA other downstream 696450 8818814 ~ 8834697 (+)
G46652 NA other downstream 2034215 10156579 ~ 10159251 (+)
G47145 NA other downstream 2362994 10485358 ~ 10511806 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location