XLOC_000719 (gprc5bb)


Basic Information

Item Value
gene id XLOC_000719
gene name gprc5bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 54673846 ~ 54680103 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001196
tggacacacacacacacacacctggctcTTTGTGCACTGTCAGTTGTCAATGGAAACTAATTAGAAGTCTTTACTcagaagtgtgtttgtgtgtgtgtttgtgtttgcacgCTGCAGATAATGACGAGAGAGTGTGCGACACGATCACCAGTGAGTTTtgctgtggtttatttatagtgtgagtgtgagtgtgtgtgtgtgtgtgtgcatcagcaGCGGTCACAATGCTTCAAATGAAGCCCTTCAGAGAGAGAGATGCGTGTGACGGCTGAGGATGGACGACACTGCGCTTCACATCCACTCAGACGGAGATTTCACCCTCGACTGCACCAGGATCTGTGGAGGAAACTAAACCAGCATCTCTCATCCACAAGAGGAGCTTTAACACTCGTAAAAAGACGTTTAAAGAAGGAAGAGCCGCGTTAACGACAGATATACACGGTCTGCTGCAGATGCTGTGTGTAGGTGTGAATCTGTCTGTCGCGCAGTTTCCGGATTTTCTGTCACTGATTTTCGATTACTGAGTGACTGGAGGAGAGGGAAAGGGGGAAAGCGCGATGCTAGAGCTCGAGTTTGTGTTTTTCAGGATAATTCCCACTCGATAAGAAGAGATTTGAGCTGTGGGGATGTGTAGAAACTCTCCTGCACTACATAAACACACATCAACATAACTCTCGAGGTGTATTTTCAACTCTTTACGCCATGGCTGTGAGGCCCACCCTCATCTTTATTCtctctctgattggctgctgtgcTCTTGAAGACCCACCCCAGGCTTTAGCCCCTCCCCCTCCCCGTGGGTGTGGCACCGCGGTGGACCCGCCGTACAGAGTTCTGTGTGACCTGGAGTCAGTGTGGGGCATCGTGCTGGAGGCCATAGCCTGCGGCGGCACTGTATCCGCTCTGATTCTGGCCATCATTCTCCTGGCCAAGCTAAAAACGGTCACGGAACCAGACAAAAGATGCGGCGTTGGTCCGCTCCTCCTGCTATTGGCTGGAACGATGGGTCTGTTCAGCCTATCGCTGGTGTTTATGGTGGGGCGTGGCGAGGTGCTCTGCATGGTGCGCCGCGGGCTCTGGGGGGCGCTGTTTGCTATGTGTTTCTCCTGTTTGCTGGTACAGGGAGTGCGGCTGAAGAAGCTAGCCGGAGGGAGGCGGAGCCCTGCAGGAAGTTCTCTCGCCGGATTGGCTTTCGCGCTCACTGTTGTTCAAGGCATCATCGCTGGCGAGTGGCTGCTGCTTACGGTGGTCCGTGAGGGACATGCTGCCTGTGAATACCTGCCTTTAGACTTTGTGCTGGTTTGCAGCTATGCTTTAGCACTGTTGCTAGCTGCTAGCGTGTTGTCGCTAGCTGTGGTGTTGTGCGGAGGGAATAACAGAGAGGAATCCAGCAGGAAGAGGATGAAGTGGAGGTGTAACGCCGTCTGGCTTTTCCTTTCATGTCTTTCGTCGCTTCTTCTATGGGTCGCCTGGCTTGGGCTTTACCTTTATGGTGATGTCGGCATCTCGATTGTGGCGAAGGATTGGGATGAGCCGGCATTAGCGGTTGCCTTGGTGACCGAGGGTTGGGTGCTGTTGTTGTTTCACGCTATCCCGGAAACACACCTGTGTTTGCGTCCGTCCAGTCAGAGGAGCGCAGATACCGCACAGAACTACTACGACACCCCACAGCCTCCAGCTGCACAGGGTTACCATGACGATGAGCGGCCGACCAATCCCAGAGCTCCGTTCACCGAGAGTCAGGCGTACACTGTAGAGGAGCACAGCGCAGTTCTGCAGGCTGGAGGTTACCATAATGGATTAATACGGCCCGCTCTGCCTTTCCGGAGTCACGTTTACCAGCCTACTGAAATGGCTCTGCTCATGAATGCAGGACCGATCCCCACGGCTCCTCCAAACTTCACAGGCAGGCATCTGTGGTGAGAGCAATAACGTCCTCGTCTGCCCCGGGACGGCTCACAGGGTCAAACGGCACTTTATTACAGTTCCATAATAATCATTTGGAAATGCTCCTCT
>TCONS_00001197
ATGGCTGTGAGGCCCACCCTCATCTTTATTCtctctctgattggctgctgtgcTCTTGAAGACCCACCCCAGGCTTTAGCCCCTCCCCCTCCCCGTGGGTGTGGCACCGCGGTGGACCCGCCGTACAGAGTTCTGTGTGACCTGGAGTCAGTGTGGGGCATCGTGCTGGAGGCCATAGCCTGCGGCGGCACTGTATCCGCTCTGATTCTGGCCATCATTCTCCTGGCCAAGCTAAAAACGGTCACGGAACCAGACAAAAGATGCGGCGTTGGTCCGCTCCTCCTGCTATTGGCTGGAACGATGGGTCTGTTCAGCCTATCGCTGGTGTTTATGGTGGGGCGTGGCGAGGTGCTCTGCATGGTGCGCCGCGGGCTCTGGGGGGCGCTGTTTGCTATGTGTTTCTCCTGTTTGCTGGTACAGGGAGTGCGGCTGAAGAAGCTAGCCGGAGGGAGGCGGAGCCCTGCAGGAAGTTCTCTCGCCGGATTGGCTTTCGCGCTCACTGTTGTTCAAGGCATCATCGCTGGCGAGTGGCTGCTGCTTACGGTGGTCCGTGAGGGACATGCTGCCTGTGAATACCTGCCTTTAGACTTTGTGCTGGTTTGCAGCTATGCTTTAGCACTGTTGCTAGCTGCTAGCGTGTTGTCGCTAGCTGTGGTGTTGTGCGGAGGGAATAACAGAGAGGAATCCAGCAGGAAGAGGATGAAGTGGAGGTGTAACGCCGTCTGGCTTTTCCTTTCATGTCTTTCGTCGCTTCTTCTATGGGTCGCCTGGCTTGGGCTTTACCTTTATGGTGATGTCGGCATCTCGATTGTGGCGAAGGATTGGGATGAGCCGGCATTAGCGGTTGCCTTGGTGACCGAGGGTTGGGTGCTGTTGTTGTTTCACGCTATCCCGGAAACACACCTGTGTTTGCGTCCGTCCAGTCAGAGGAGCGCAGATACCGCACAGAACTACTACGACACCCCACAGCCTCCAGCTGCACAGGGTTACCATGACGATGAGCGGCCGACCAATCCCAGAGCTCCGTTCACCGAGAGTCAGGCGTACACTGTAGAGGAGCACAGCGCAGTTCTGCAGGCTGGAGGTTACCATAATGGATTAATACGGCCCGCTCTGCCTTTCCGGAGTCACGTTTACCAGCCTACTGAAATGGCTCTGCTCATGAATGCAGGACCGATCCCCACGGCTCCTCCAAACTTCACAGGCAGGCATCTGTGGTGAGAGCAATAACGTCCTCGTCTGCCCCGGGACGGCTCACAGGGTCAAACGGCACTTTATTACAGTTCCATAATAATCATTTGGAAATGCTCCTCT

Function

symbol description
gprc5bb Predicted to enable protein kinase activator activity and protein kinase binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in extracellular exosome; intracellular membrane-bounded organelle; and plasma membrane. Orthologous to human GPRC5B (G protein-coupled receptor class C group 5 member B).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0070062 extracellular exosome cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0043235 receptor complex cellular_component
GO:0019901 protein kinase binding molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0030295 protein kinase activator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-75 Predicted to enable protein kinase activator activity and protein kinase binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in extracellular exosome; intracellular membrane-bounded organelle; and plasma membrane. Orthologous to human GPRC5B (G protein-coupled receptor class C group 5 member B).

Ensembl:

ensembl_id ENSDARG00000075141

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001196 False 2016 mRNA 0.53 4 54673846 54680103
TCONS_00001197 True 1314 mRNA 0.57 3 54677173 54680103

Neighbor

gene id symbol gene type direction distance location
XLOC_000718 si:ch211-202h22.7 coding upstream 13923 54650048 ~ 54659923 (+)
XLOC_000717 si:ch211-202h22.8 coding upstream 25080 54638126 ~ 54648766 (+)
XLOC_000716 si:ch211-202h22.9 coding upstream 36468 54626491 ~ 54637378 (+)
XLOC_000715 NA coding upstream 60367 54611838 ~ 54613479 (+)
XLOC_000714 si:ch211-202h22.10 coding upstream 65814 54606354 ~ 54608032 (+)
XLOC_000720 knop1 coding downstream 3552 54683655 ~ 54694012 (+)
XLOC_000721 NA coding downstream 18070 54698173 ~ 54700755 (+)
XLOC_000722 pi4k2a coding downstream 57250 54737353 ~ 54755556 (+)
XLOC_000723 nlrc6 coding downstream 86840 54766943 ~ 54785183 (+)
XLOC_000724 si:ch211-196h16.4 coding downstream 154016 54834119 ~ 54861588 (+)
XLOC_000712 NA non-coding upstream 204557 54277243 ~ 54469289 (+)
XLOC_000713 NA non-coding upstream 269699 54401933 ~ 54404147 (+)
XLOC_000710 CABZ01067150.1 non-coding upstream 487690 54186039 ~ 54186156 (+)
XLOC_000703 NA non-coding upstream 685070 53982614 ~ 53988776 (+)
XLOC_000729 NA non-coding downstream 279389 54959492 ~ 54985297 (+)
XLOC_000733 CU467849.1 non-coding downstream 448362 55128465 ~ 55128579 (+)
XLOC_000735 NA non-coding downstream 504661 55184764 ~ 55191262 (+)
XLOC_000741 NA non-coding downstream 634371 55314474 ~ 55579436 (+)

Expression


Co-expression Network