CI01000006_08305571_08341681


Basic Information

Item Value
gene id CI01000006_08305571_08341681
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8305571 ~ 8341681 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08305571_08341681.mRNA
ATCGACAGTCGGATGCTGATGGAAGGACTGCAGAGATTTGGTGCCATCCCAACGTATCTTCCAGTCCGATATCAGGTGCTAAACGCAGAATCTGCCTTCTTCCTGAAAGAGGCCAACCAGGACATCATGAGAAACTCCAGCCTGCAGGTTCGTACAGAACTTTTCTTTATCCAACAAGCCAGAAAGACGCCGTCGGTCAATGCCAGTTACGGACCGCTGTATGTGGAACAGCCCGTGCCCATGGAGCTTCTGGGCCCAGGACTCTTCAACAACCCTTCATCCACGTCCCCATCATCCACTTCTTCTCCACTCTTTAGTTTTAACTGGAAAGTGCAGACTTTCATTATCAGTGAGCGAATCCACCCCAGTTGGCCAAAGGTTCAGGTTCTCTTCTACTTAGTAGGCCGGGACTGGGACGACTACAGTGCCATGGACAAGTTGCCATGTGTAAGGATGTTTGCCTTCCATGAAACCCAAGAGGTACGAGGCACCTGTCGTCTGAAAGGGGAACTCGGACTGTGTGTGGCTGAACTGGAGCCACTGCCTAGCTGGTTCAGTCCCCCTAGTGTCATACCAGGTCGACAGAGATCTCCAGAGCTGGTTGAAGGCACTCCCGTGGAGCTGTATTACATGCTACAATCCACTGACACTGGGGAATGCAGCTCGGAGGACTCCCGCAAGACCAACTCCATCCGCACTGGCCAACTGGGTCCGGCCGGTTACTTCTCAGGGCCCACACCCATGCGCAGGATCGGCAGTGTACGGCTGTTCCAGCCACTCTCTGAGCTGCGTTTGGACAGTAACTTTGTGGTGATGGTTCCCTCCAGACCCATCAGGCAGAGGGAGACGGTGTCAGCCTTCCTCGCTGTCTCCACCCTTTCATCAGTAGAGATCTTCACTTTAAGGGTCAAGTTGAAGGATGGTGTGGCGTTTCTGGGGGCGAGGGCCAGCAACCCGGTTCAGTGGACAGTTAGTCAAGACGTCAGGAGTGAGGGACACAGAGTGGTCACTCTGCACTGCCGTAGGAAGGAAGCCAACTTCGGAAAAAGGTCAGTAACCATTCAATCTGTCTGTTCTATTAGTGTTTTTATTAAC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17599 TMEM132; transmembrane protein 132

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08305571_08341681.mRNA True 1095 mRNA 0.53 2 8305571 8341681

Neighbor

gene id symbol gene type direction distance location
CI01000006_08222787_08225568 MED15 coding upstream 80003 8222787 ~ 8225568 (+)
CI01000006_08198328_08199463 NA coding upstream 105905 8197881 ~ 8200145 (+)
CI01000006_08184916_08188512 NEFMA coding upstream 116272 8184799 ~ 8189299 (+)
CI01000006_08108713_08122179 NA coding upstream 183207 8108563 ~ 8122364 (+)
CI01000006_08025159_08032131 NA coding upstream 272948 8025159 ~ 8032623 (+)
CI01000006_08366730_08400944 NA coding downstream 24409 8366090 ~ 8402325 (+)
CI01000006_08528828_08531392 NA coding downstream 187147 8528828 ~ 8531457 (+)
CI01000006_08673737_08674685 NA coding downstream 331899 8673580 ~ 8675114 (+)
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding downstream 415738 8757419 ~ 8766062 (+)
CI01000006_08847431_08853895 NA coding downstream 504579 8846260 ~ 8853921 (+)
G45359 NA non-coding upstream 67165 8234738 ~ 8238406 (+)
G45392 NA non-coding upstream 146104 8159245 ~ 8159467 (+)
G45391 NA non-coding upstream 146678 8158636 ~ 8158893 (+)
G45356 NA non-coding upstream 148036 8154796 ~ 8157535 (+)
G45381 NA non-coding upstream 159491 8133207 ~ 8146080 (+)
G45528 NA non-coding downstream 231013 8572694 ~ 8574744 (+)
G45543 NA non-coding downstream 341300 8682981 ~ 8739598 (+)
G45630 NA non-coding downstream 363652 8705333 ~ 8705667 (+)
G45413 NA non-coding downstream 408230 8749911 ~ 8750496 (+)
G45734 NA non-coding downstream 582149 8923830 ~ 8924046 (+)
G45355 NA other upstream 93183 8209555 ~ 8212388 (+)
G45336 NA other upstream 283620 8019342 ~ 8021951 (+)
G45265 NA other upstream 385216 7883867 ~ 7920355 (+)
G45178 NA other upstream 621900 7607604 ~ 7683671 (+)
G45416 NA other downstream 477133 8818814 ~ 8834697 (+)
G46652 NA other downstream 1814898 10156579 ~ 10159251 (+)
G47145 NA other downstream 2143677 10485358 ~ 10511806 (+)
G47159 NA other downstream 3074548 11416229 ~ 11521703 (+)
G47318 NA other downstream 3282586 11624267 ~ 11638252 (+)

Expression


Co-expression Network