CI01000006_08673737_08674685


Basic Information

Item Value
gene id CI01000006_08673737_08674685
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8673580 ~ 8675114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08673737_08674685.mRNA
ATATATATACATCCTCAGCTCAGCTCTTTCCAGACCCCATCCAGGGTTGACCTTCAGCAGGTGTGCGGGGTCTGAAACCCAGGCCGCTTCCCAGGAGGAGTCTGCAGATTATGTAGCATTAGTGGCTGAGGTCTGGCAGCCGCAATCAAACTGCATAATGAATCGTTCTGATGCCAGCATTAATGACATGTCTCGCTGGCAAGAGCCAAAACAAAAACAAGATGACCCTCACATCAAAGAGCCGAAAAATGCTACTAAAGTGAGGCTGTTATTATTGTGCTTTGGTAAAAACAGCTCGCTGAAAACCAAGAGTCAAGCAAGGACAGAGCCTGAGCGAAGACCGCCACAGAGCTTGCATAACACCACTCGCAGTCGAGGGCCTCGTCTGCCCACGAAGGTCAAAGAAGTGGGGAAATCTGAGAAAGGAGCATGCATCCTTTGGGCAGGCAAGAACAAGATGGTGTGAATACATAAATATGCGGGAAAGAGCATAGCATGCAGTGTAAAAACAGAAAATAATGCATCTACAGCAGAATTTGAACTGACTACATACTAATAATGCAGTCCAGAAATGGGTTATTAAATCCCACACCACTTATCTAATTCCAAACCACCCACACAAGTAAGCTGCTCTTAGGGATGTGCTCACCAACCAGAACATGTTTGGCTGAGTGGTACTAACTTAATTAGGGCAAATCAAAAAGAAAATTACTTAAGACATTGGGTAGAAAAAAGGAGGATAAGAAAGTGTAAAAAGAAAGCAGATACACTAAGATAACTTTAGTTACAATGTCCACTTTTGCTTATACTGCTTAATGCTGTAGATTCTTTTTCCATTATGAAAATATAAGTTTTAAAAATTAAACAATTGCTATTTATTTATTTAACAGATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08673737_08674685.mRNA True 895 mRNA 0.41 3 8673580 8675114

Neighbor

gene id symbol gene type direction distance location
CI01000006_08528828_08531392 NA coding upstream 142123 8528828 ~ 8531457 (+)
CI01000006_08366730_08400944 NA coding upstream 271255 8366090 ~ 8402325 (+)
CI01000006_08305571_08341681 NA coding upstream 331899 8305571 ~ 8341681 (+)
CI01000006_08222787_08225568 MED15 coding upstream 448012 8222787 ~ 8225568 (+)
CI01000006_08198328_08199463 NA coding upstream 473914 8197881 ~ 8200145 (+)
CI01000006_08757702_08765273 WDR5, WDR5B, WDR5.L, BRAFLDRAFT_281422 coding downstream 82305 8757419 ~ 8766062 (+)
CI01000006_08847431_08853895 NA coding downstream 171146 8846260 ~ 8853921 (+)
CI01000006_09004949_09014310 GSNA, GSN coding downstream 329560 9004674 ~ 9014589 (+)
CI01000006_09066050_09070383 BARH1, BARHL1B, BARHL1 coding downstream 390848 9065962 ~ 9070581 (+)
CI01000006_09098943_09103197 NA coding downstream 423568 9098682 ~ 9104172 (+)
G45528 NA non-coding upstream 98836 8572694 ~ 8574744 (+)
G45438 NA non-coding upstream 340102 8332579 ~ 8333478 (+)
G45359 NA non-coding upstream 435174 8234738 ~ 8238406 (+)
G45392 NA non-coding upstream 514113 8159245 ~ 8159467 (+)
G45391 NA non-coding upstream 514687 8158636 ~ 8158893 (+)
G45543 NA non-coding downstream 7867 8682981 ~ 8739598 (+)
G45630 NA non-coding downstream 30219 8705333 ~ 8705667 (+)
G45413 NA non-coding downstream 74797 8749911 ~ 8750496 (+)
G45734 NA non-coding downstream 248716 8923830 ~ 8924046 (+)
G45748 NA non-coding downstream 280185 8955299 ~ 8955505 (+)
G45355 NA other upstream 461192 8209555 ~ 8212388 (+)
G45336 NA other upstream 651629 8019342 ~ 8021951 (+)
G45265 NA other upstream 753225 7883867 ~ 7920355 (+)
G45178 NA other upstream 989909 7607604 ~ 7683671 (+)
G45416 NA other downstream 143700 8818814 ~ 8834697 (+)
G46652 NA other downstream 1481465 10156579 ~ 10159251 (+)
G47145 NA other downstream 1810244 10485358 ~ 10511806 (+)
G47159 NA other downstream 2741115 11416229 ~ 11521703 (+)
G47318 NA other downstream 2949153 11624267 ~ 11638252 (+)

Expression


Co-expression Network