CI01000006_09334843_09337295 (FAM216A)


Basic Information

Item Value
gene id CI01000006_09334843_09337295
gene name FAM216A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9334801 ~ 9337403 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_09334843_09337295.mRNA
GTAAATATTCTACAGGTCTCACAGTTCAAGTAACACGCCGGAATGAAAAAGCACGTGAAATTCCTTGAAAACAACAGCGATAAAAGCCGTCTGCACCACAAAAAGTCATTTTTGCCTTTAAGGCCATCTGGTCTCAACCATGTGCAAACTGGAAAAGCAAACTCAGTATTTGGATATAAAATACAGAGACCTGCAACTGTACAAGTGCCAGAACAAAATCAGGACATTAAAACTATTCATATCCCTAAGACCATGACTGCTGCTCCATTTTTACAGCATCCAGGCTTGACACCCGGACAGAAGCGTTTCCTGTACAGTATCGCAGAGGCCTACAGCAAAGAGCACATGCGGCAGCTAATACGTCAACATTATATGAATGTATTACACAGGTGTATCAGGACAGTGCCGGATGCGCATCATGTGAATGTAAATGTGAAACTGCAGATGTCAACATACACCCCAGAAGCAGAACACATGACAAACTCCCAAAGTACACCAATGAGCAAGACAAAAGAAAGTGGAAAGAGATCTTTGACTTCAGAGAAAGTCAAGAAAACAACTTTACCTAAAATTGTAAATCATCAAAGAGTGTCTTCTGGATTAGCAAAATCGAACATGGTACAATCAAGAAAAAGGAGGACTACCATTGCAAAACATGCTTCTTCACAGGGATCACGCCCATGGGAAGCTGACTTTGAATGGGAGGCAACTGAAACAGATTCCTACCTTGCTGGACAAATGAGTGGCCTGTCTTTCAACGAATCGGAAGATGATGAAGAGGACTTTCTATTTCTTACCTAACGCATCAATCTATGTTTTTGACATTTAAGAAAAATTTCTAACAAAATCTTAAAACATATCCTAGACAAACAATCCAGTTGTTCCAGACATTTCAAAATAGTAATTTTA

Function

symbol description
fam216a Orthologous to human FAM216A (family with sequence similarity 216 member A).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_09334843_09337295.mRNA True 909 mRNA 0.40 7 9334801 9337403

Neighbor

gene id symbol gene type direction distance location
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding upstream 13023 9320331 ~ 9321778 (+)
CI01000006_09192219_09195918 NA coding upstream 138817 9191897 ~ 9195984 (+)
CI01000006_09107491_09114820 GTF3C4 coding upstream 219730 9106826 ~ 9115071 (+)
CI01000006_09105004_09106470 NA coding upstream 227838 9104215 ~ 9106963 (+)
CI01000006_09098943_09103197 NA coding upstream 230629 9098682 ~ 9104172 (+)
CI01000006_09497508_09511925 NA coding downstream 159403 9496806 ~ 9512720 (+)
CI01000006_09569228_09574340 NA coding downstream 230877 9568280 ~ 9575061 (+)
CI01000006_09712289_09783579 UNC5DA coding downstream 374886 9712289 ~ 9783579 (+)
CI01000006_09836923_09844045 NA coding downstream 499520 9836923 ~ 9846207 (+)
CI01000006_09884959_09889794 NA coding downstream 547036 9884439 ~ 9890289 (+)
G46273 NA non-coding upstream 8283 9280325 ~ 9326518 (+)
G46278 NA non-coding upstream 50906 9190362 ~ 9283895 (+)
G46325 NA non-coding upstream 109384 9218451 ~ 9225417 (+)
G46316 NA non-coding upstream 137414 9189983 ~ 9197387 (+)
G46296 NA non-coding upstream 175895 9158577 ~ 9158906 (+)
G46360 NA non-coding downstream 13795 9351198 ~ 9351415 (+)
G46371 NA non-coding downstream 40656 9378059 ~ 9378334 (+)
G46383 NA non-coding downstream 78617 9416020 ~ 9416289 (+)
G46470 NA non-coding downstream 109042 9446445 ~ 9446677 (+)
G46483 NA non-coding downstream 132979 9470382 ~ 9484816 (+)
G45416 NA other upstream 500104 8818814 ~ 8834697 (+)
G45355 NA other upstream 1122413 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1134656 8197881 ~ 8200145 (+)
G45336 NA other upstream 1312850 8019342 ~ 8021951 (+)
G45265 NA other upstream 1414446 7883867 ~ 7920355 (+)
G46652 NA other downstream 819176 10156579 ~ 10159251 (+)
G47145 NA other downstream 1147955 10485358 ~ 10511806 (+)
G47159 NA other downstream 2078826 11416229 ~ 11521703 (+)
G47318 NA other downstream 2286864 11624267 ~ 11638252 (+)
G48094 NA other downstream 2940217 12277620 ~ 12279541 (+)

Expression


Co-expression Network