CI01000006_09497508_09511925


Basic Information

Item Value
gene id CI01000006_09497508_09511925
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9496806 ~ 9512720 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_09497508_09511925.mRNA
CTTTAAAAAACCCCTGTAGAGAGATTTACTTTGTCCGTGACATGCATGAATTCCAGTGGATTTGGCTGTTTCAAGCTTAGTCTGGTGCTTAAATGATTATTGAGTGTATGTGTTTCAATTTTCATGCATATTAATCCAAGCACATGCTGACTGGGGACACTCTCAGCACACTTGGCTTGTGTCGTTCTGTCGAGCTGTAATTTGATCTGCCAGCCGTGAGAGACCGCTGTGTAGATTTCTACAAAGTACAACAGCTGGTGTGATTCGAACATGTTAGCATGTGACAGACTCCCAAACCTAATAACTTTACCTCAAGCTGAACAAAAGCTCATATGAATAGAAGTTCTGCCTGTGTGTTTGTTTTATTTCATCAGGGAAAGTCTTTTATTATGCAGACTGCTGTGAGATTACAGGACGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGACGTAGCATTGCAATTTAACATTTACTAATTGCAGGCACAATTCCCTTTGGAGCTGTGTGGATCAAGGGCGCAATGGTGATAGAACATTCCAATAACACTTTATGAGTCGCCCCTGCCGGATATCAAACCTGTATTTCTCGCACCACCAACCCAAACCCCTAACCACCAGGCTATAACCACCATGCGTGTAGATGTTTGTAAAACTGTGGGAAACTGTTGTTCTACTCTGGGATCTACATCCCACCATGCGGTCCGTTCCTCTTCGCTGTCCTCCAGAGGGGAATATCAGCATCCTCTCCTGTTTGAGGAGACCAGTGTCTGGAAAAGCACAATATCTTGCCTACGTTTGTGGTGCGGCTTCTGTTGTGTCATCAAAGAGAGACGGTCGGGTCATTGTATCTCCCATAGTCAGTTGTTTTCAGTGGTATCTCAGCATGACCCTGGAATCAGTCCTGGCCAAGAAAATCACAGCAGCGTCACTGATGAGTAGTGATTCAATTACAGCAGTGCGAGGTGTCCTTCTTTCTACCTGCCTTCCGGGTGATCTCTTCCTCTCTCTATCGCTCCTCTTCTCTTATTTTTTCTGGGACAATAGGGGAATAGAGGTGGAGGCTAACAGCTCTAAAACTACTTCTGGTACCGAGGGTGGCTTTGTCTTCCAAAAGAAGAGAATGTTCTTTCCCTCTGACCACAGTGTGGACATAAACTCCAGAGAGGACACTGTCACTGCCATGGAGACATTCTGGAACTGTTGCCTTGGAAACAGTAATCATGGCTTGAGCGAGGGTAGGGAGCCAAGTACACATCATAGTTCTCCCCCAGCTGCTCTTTTCACAGACCCGTCTTGCATCCGCCTCAGCTGTTCCCGTAGGAAGACAAACACGGTCGACGCCAATACAACCACAGCGCAACGCTCCCTCAACGCCGCCGAACGGATGAACTTCGCGGGGAGCCACAAAACCCTCACCAACTCCCCACAGTTCCGGCTGCGGATACAGCGTGTAATAGAAGACGATAAATTATGGATTCCTTATCTGGCTCCAAGGATAAACCAATCTGATTCACGGGCCAATTAACAAGCATTCTTGCACCTCGACGGAGCGTGCTTAGTGTCTCATGAATGAGTGGCATTCTCTGAGAAAGCGCACGTTTTTATGCGATTCTCATAACACATTCTTTCTCAAACTCCATGCTTTTCCTTGCACATATTTAAATTTTATGATTTTATGTTATATAATATATCGCCCAATTGACATTCATCATGTTTCGTGACTTTTTTTTTTTTTTTTTAATCCTTGCCATCGATTCTGGCTTTCAAAATACACTGTGCCTTACGTAGCTTCTTGCAATCAAGACCATTCTTAACCCCCCTCCCCCACCTGCTCTTCCTCATCATACACCTGACTCATCCTCACCTCTAACCTCACACTACAGAGAGGCTTTAGATGAAGCGTAATGATGGTCAGACAGAGAGGCTCTGAGATGCGGGAAGGGTTGTGTTTTGAGGGCACTCTTTTGGTGCGCGGCGCTCTGAAGCGGGCTGCGTTTGATCTCCTCGAAATGCCACAGGTTATTGTGTTTCTGTTTAAAGTGGTCTTACAGGAGACATCTGGAATGCTGTCAGCTCTGGGGCTGAATTGGGGAAAAGGTGGGGGATTTTACAGAAGGTGCTGTTGTGTTGTTCATGCGAGCTCTAAGACTGTAGACGTTTATTTTCAAGCTGTATTATTTTTCATAGTTCTTGTATTTTGCCACAATACAGAGAGAAATGTTATTATTTTGAGCAAATAGTTTTTTCTGCTTTCATTTCGCACTCATGTACACCTTTAGTACATTAGGTTGGTGTAAAGAGAGAGAGAGAGAAAAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_09497508_09511925.mRNA True 2328 mRNA 0.45 5 9496806 9512720

Neighbor

gene id symbol gene type direction distance location
CI01000006_09334843_09337295 FAM216A coding upstream 159403 9334801 ~ 9337403 (+)
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding upstream 175028 9320331 ~ 9321778 (+)
CI01000006_09192219_09195918 NA coding upstream 300822 9191897 ~ 9195984 (+)
CI01000006_09107491_09114820 GTF3C4 coding upstream 381735 9106826 ~ 9115071 (+)
CI01000006_09105004_09106470 NA coding upstream 389843 9104215 ~ 9106963 (+)
CI01000006_09569228_09574340 NA coding downstream 55560 9568280 ~ 9575061 (+)
CI01000006_09712289_09783579 UNC5DA coding downstream 199569 9712289 ~ 9783579 (+)
CI01000006_09836923_09844045 NA coding downstream 324203 9836923 ~ 9846207 (+)
CI01000006_09884959_09889794 NA coding downstream 371719 9884439 ~ 9890289 (+)
CI01000006_09891107_09897750 NA coding downstream 378387 9891107 ~ 9897763 (+)
G46483 NA non-coding upstream 11990 9470382 ~ 9484816 (+)
G46470 NA non-coding upstream 50129 9446445 ~ 9446677 (+)
G46383 NA non-coding upstream 80517 9416020 ~ 9416289 (+)
G46371 NA non-coding upstream 118472 9378059 ~ 9378334 (+)
G46360 NA non-coding upstream 145391 9351198 ~ 9351415 (+)
G46519 NA non-coding downstream 24213 9536933 ~ 9537485 (+)
G46530 NA non-coding downstream 33142 9545862 ~ 9546073 (+)
G46525 NA non-coding downstream 62595 9575315 ~ 9587799 (+)
G46524 NA non-coding downstream 82934 9595654 ~ 9602520 (+)
G46541 NA non-coding downstream 141586 9654306 ~ 9655184 (+)
G45416 NA other upstream 662109 8818814 ~ 8834697 (+)
G45355 NA other upstream 1284418 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1296661 8197881 ~ 8200145 (+)
G45336 NA other upstream 1474855 8019342 ~ 8021951 (+)
G45265 NA other upstream 1576451 7883867 ~ 7920355 (+)
G46652 NA other downstream 643859 10156579 ~ 10159251 (+)
G47145 NA other downstream 972638 10485358 ~ 10511806 (+)
G47159 NA other downstream 1903509 11416229 ~ 11521703 (+)
G47318 NA other downstream 2111547 11624267 ~ 11638252 (+)
G48094 NA other downstream 2764900 12277620 ~ 12279541 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019477 NA non-coding NC_007132.7 CM002905.2 16729381 ~ 16734248 (-)