CI01000006_10363884_10364804


Basic Information

Item Value
gene id CI01000006_10363884_10364804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 10363796 ~ 10365571 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_10363884_10364804.mRNA
ATATAAAAACACTGGCACTGTCTGATGAAGACGACAACAAGGATATAAACGCTGATGCCTCCCCTGGAAAATCAGTCCAAAAGTGACAATGACTTCAGCAACAGTGATTCCATCGCCAATGTCAAGAATTAAAGACAATTTTTCACTTCTGGAGGTAGAAGTAGTGGAGCTAAAAGAATTGATACTGTCCCACCTGAAAGACAACAACATGGAACAGCTGACTATTGACATAAAGAATTTAAGACAAGAAGTTGAATATCTGCAGAGACACAGAGAAGAAATGTCAAAAGAACTTCAGCAAACCAAAGATGAACTGACTGAAGTAAAATCAACTTTAGGAAGACAACTAACAGAAGTTAGAAAAGAAATGCAGGAGGAGCTATCTGCCTTGAAGTCAGTACTCCACACCAAAGATGAACTCATCAACAATCTGAAAGAAGAACTCAATTCTGTTTCAGCACCTAAAGAGTCTTCTAAACCCTTGATGTGCCCAGAGATACTCACAGAAAATCCTCAACCTGAACAGCTTCCAGTGGAGGAAGAGTCTCACTGCTCGACTGATCCAACATCCCAGATCCCCAGCTCCGCTGCAGAGGACCCGAGAGAAACACACGCTCTTATCCTGACTGATTCAAATGGGAAATACGTCAATGAGAAACTTCTTTTCCCAAATATGAGAGCCAAGAAAATCTGGTGCCCAAACACAAGAAGTGCTTTTCAGATCCTATCTGAGAGAAACCAGAACGAAAACTATAAGCACATCATTATCCACACAGGGACAAATGATTTAAGGCCCATGAAGGGACATGTGGCTCCTGTGATCAGAGAGGTGGCGATCAGAGCCACACAACGTTTCCCAGAGGCTAAAATAACTCTGTCTGCACTACTACCACGCACTGATGTGCCATTCCACATGATCCATGGAAATAATGTGGAGCTTTCCAGAAGTTGTGCACTTATTCCTAATGTTCACCTCGCCCATCACAAAGACATACCATCATATGCATGACCATGTACATCTCAACAAGCAAAGAGTGAAAGTCTTCGCCAGAGTGCTGAAAAGCACAGCCCTTGGAAACACATCAAGAAACAGCAGAAACTCCAATGACAAGAGAAGATCTCAGTCACCAAGAACACTCCGTCCTTCAGCAGAGTTCAGAACAACCACAGGACCTCCATCACAACACCAGAGCTACACAGCGGCAAGAACCATCCGTCCTCCAATAGAATCCAGATCGGCCACAGGACCTCCGTCACAACACAAGAGCTATGCAGCAGCTGTTCAACAACCACAAAACCCTGCAGCTGCTGAACTCAACCAGATAAGACATCTACTGAACATCATCTGCTCCAGACTGAGGACATAACCTGCATAACTCACACACACTTATACATATACACACACACACACACACATTACAGAAAAACTTATCCATGAAATCATTGAAAATCAGTTGTTGGAATATACAGGGTCTGCACTCTTCTACTTTTGGTAATAAGACTGCAGACCAAGACTTACTCAGCAGTGTAACAGATATGGACATCTGTATCTTTCATGAGACGTGGTGTCGTAGTAATGAGACTTTACATTGTCCAATAGGATACAAGGACATTTTTGTTCCTTCATTAAAAAATTAAAAAATAAAATGTGGCCGAGACTCAGGTGGAATACTTATATGGCACAAAGACAATTTGAAACATTAGATATTAATGGGATAAATTTAGCAACAAAAAACTTAAATTATATATTTAAAACATTGGCAACTCTATCTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_10363884_10364804.mRNA True 1776 mRNA 0.41 1 10363796 10365571

Neighbor

gene id symbol gene type direction distance location
CI01000006_10177090_10192651 NA coding upstream 170277 10177090 ~ 10193519 (+)
CI01000006_09998680_10008491 LHX5 coding upstream 354748 9998680 ~ 10009048 (+)
CI01000006_09918611_09921465 MZT2B coding upstream 442003 9918611 ~ 9921793 (+)
CI01000006_09910027_09913958 NA coding upstream 449692 9909370 ~ 9914104 (+)
CI01000006_09891107_09897750 NA coding upstream 466033 9891107 ~ 9897763 (+)
CI01000006_10518326_10566504 SFSWAP coding downstream 152755 10518326 ~ 10566504 (+)
CI01000006_10574971_10578629 NA coding downstream 209037 10574608 ~ 10578964 (+)
CI01000006_10593624_10605226 NA coding downstream 227673 10593244 ~ 10606273 (+)
CI01000006_10707037_10743311 MMP17, MMP17A coding downstream 341373 10706944 ~ 10743594 (+)
CI01000006_10747943_10768998 ULK1B coding downstream 382372 10747943 ~ 10769038 (+)
G47102 NA non-coding upstream 3429 10343313 ~ 10360367 (+)
G47079 NA non-coding upstream 59610 10303952 ~ 10304186 (+)
G47062 NA non-coding upstream 86428 10277124 ~ 10277368 (+)
G47054 NA non-coding upstream 95162 10264623 ~ 10268634 (+)
G47041 NA non-coding upstream 126267 10237327 ~ 10237529 (+)
G47106 NA non-coding downstream 37703 10403274 ~ 10481243 (+)
G47108 NA non-coding downstream 43305 10408876 ~ 10462424 (+)
G47140 NA non-coding downstream 96891 10462462 ~ 10483165 (+)
G47148 NA non-coding downstream 127778 10493349 ~ 10495939 (+)
G47109 NA non-coding downstream 142379 10507950 ~ 10508752 (+)
G46652 NA other upstream 204545 10156579 ~ 10159251 (+)
G45416 NA other upstream 1529099 8818814 ~ 8834697 (+)
G45355 NA other upstream 2151408 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 2163651 8197881 ~ 8200145 (+)
G45336 NA other upstream 2341845 8019342 ~ 8021951 (+)
G47145 NA other downstream 119787 10485358 ~ 10511806 (+)
G47159 NA other downstream 1050658 11416229 ~ 11521703 (+)
G47318 NA other downstream 1258696 11624267 ~ 11638252 (+)
G48094 NA other downstream 1912049 12277620 ~ 12279541 (+)
G48081 NA other downstream 2011435 12377006 ~ 12384827 (+)

Expression


Co-expression Network