CI01000006_10676705_10699710


Basic Information

Item Value
gene id CI01000006_10676705_10699710
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 10676367 ~ 10699882 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_10676705_10699710.mRNA
ATACTTAACAGGAGCTGATAGAGAGAAGGAGGTTAGGGTTTTCAGGAAATGACATGGGCCAGATTTGTCCACACACATACGCTATCAGCCAGACCACTTTTCTGACAGAGCTCTTAAATTTAGAGAGGATTGTCATCTCACAACCTTTAATAGTTAGGGGCGACCTAAAAAGATGTCAGAGACTCTGTCTTCGCAGTCTGTATGGAAGCAGATTTTCCAAAAGATCAACTCGGCCAGGGTTACTGGCTTTGATCAAGTGCATTACTGTGCTGTGAGGGGCCCGAACAGACGGACCAACCCTGGCGGTCCGGAGGACCAACTCTTCCTGCACACCACTCACGTCTCACACCAGAGAACAGCAGAGAACATAAGTTCAAAAAGAAAAACCAATCCTCTTACTGGGGCTCTGCAGATCAAACCAACTAAATGTCACAGAATCAGTGAATCAATTTTTGTAGGACGCTCTGAACCAGATGAAATTAAATGTCGTTCTGCTTCTGTATATCGTGCAGCGGAAGGGGGCGAGTTTTTTGTGGATGAGCCTGTGCGATCAGGGAAGGGCGCAGAACCACTGATGCTCACTTTGAAGCAGATAAATGTGCAGAAAAGAAGCACACAGGTGATTGATGAGAAGGCCACCCTGGAAAATAATGTGTTCTCTAATGTCGTTTTTGTCAACCAAATAAGTTCTGATCAGAGAAGGTCAACTCTACAGTAAAATCAGTTTATAAAATTACCAAGAGCCCCCAAAGGTTCAGTTGGGTAATGAAAAATTGAAAACCGAAACAAGAGTCTGTGACTTCACAATTCACGACGTTACGATGTTTAAATGTCAACAAATGCATCAACATCTACAAAACATGAGAAAGGGCAAAATTATATTTGATTGTTTTCAGGGCCCAGTATCTACTAGTCTGGCTGTCACACTTCATACTCCAGTGAATATTTCTCAGGGTAAGAAAGTCAATTTCTGCACATACCTACGGAAGCCTGTTCCTGCATGTAAAAATGAAAAAGAAAAAAAAGTAGTCACATTCTATTGAGTTATAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_10676705_10699710.mRNA True 1056 mRNA 0.42 4 10676367 10699882

Neighbor

gene id symbol gene type direction distance location
CI01000006_10499329_10508831 NA coding downstream 166712 10499240 ~ 10509655 (-)
CI01000006_10453630_10483241 NA coding downstream 192361 10453613 ~ 10484006 (-)
CI01000006_10402704_10447782 NA coding downstream 227266 10402695 ~ 10449101 (-)
CI01000006_10372387_10387314 NA coding downstream 288765 10372129 ~ 10387602 (-)
CI01000006_10349084_10362629 NA coding downstream 312780 10348973 ~ 10363587 (-)
CI01000006_11320839_11338355 STXBP1, STXBP1A coding upstream 620580 11320462 ~ 11338355 (-)
CI01000006_11388077_11391485 NA coding upstream 687612 11387494 ~ 11391485 (-)
CI01000006_11459706_11462546 NA coding upstream 759406 11459288 ~ 11462605 (-)
CI01000006_11530728_11535297 NA coding upstream 830484 11530366 ~ 11535900 (-)
CI01000006_11596063_11609407 NA coding upstream 895757 11595639 ~ 11609407 (-)
G47444 NA non-coding downstream 156016 10518183 ~ 10520351 (-)
G47410 NA non-coding downstream 367266 10308880 ~ 10309101 (-)
G47053 NA non-coding downstream 412047 10264081 ~ 10264320 (-)
G47544 NA non-coding upstream 31563 10731445 ~ 10732231 (-)
G47558 NA non-coding upstream 53276 10753158 ~ 10757542 (-)
G47568 NA non-coding upstream 76936 10776818 ~ 10777674 (-)
G47545 NA non-coding upstream 84984 10784866 ~ 10785977 (-)
G47580 NA non-coding upstream 129018 10828900 ~ 10830837 (-)
CI01000006_07500281_07507754 NA other downstream 3165411 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 3699495 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 6114299 4559509 ~ 4562068 (-)
G43549 NA other downstream 6320939 4352510 ~ 4355428 (-)
G47658 NA other upstream 331029 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 950481 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 1634527 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 1650877 12569205 ~ 12582487 (-)

Expression


Co-expression Network