CI01000006_11069210_11101466


Basic Information

Item Value
gene id CI01000006_11069210_11101466
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11068275 ~ 11101489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11069210_11101466.mRNA
ATATAAAACAATATAGTGGTATTTGTACTGATTGCACTTGGAGGTGAACCAATGTTGTTTTACGCAACCTGTCACTAAAAGGATAGTTAATGTAAAGACATTTTATTTCTTTATTTTTTTACAGTATGTGATGTCCTAGTGAACTGCCTTTGGCCACTATTTCCTTGTTTTGGGACGGAGATGAGTGTTGTGATCTACCCGATACCCAGTAGATATTTGATTTCCCTTAATTTAGACATCACCTTTCCTCTTAAAAAAAAAAAAAGAAAAAAAAGAAAAAGAAAAAAAAGGAAAAATATATATACCAGGTGCCAAATTTATTACAGCACTAGTTTGTCTCTGTGTGCTGTATAGGCTACTTTGTCCAACTAACCTGTGGCTAATCTCTTTGGATGATGTCATGTTTGCATGTTATGATGACATATGTGCATGTAGGAAATTGTAAACATTCATTCATGTTTTTCTATGAGGAGTTAATTGGCTGTTGATTTTTTTTTTTTTTTTTTTTTTAAGAAACAATCTTTGATACACTTACCCCTGGATTTCTGGGAGAAAATTAGAAGACCATGCACTTCTCAGTTTGTTGTAAAAGAGTTGTTGAACAGTGGAGCGATGCACAGAGACGACTGCCTCACTCCTGTGATCTGATGATTGATCTATGATGCCATATATTTTTGCTCATTGACTCTTATCAGTCTTATCATTTCTACCATTTACATTTTGTATGAAAAAACATCACTGAATTGAAAGATATATGGAAATAAATCTTGGGGGGGAAAATGGTTGCTTTTCTATTCGATTTTAATTTGGTAATGAGATGTGTGTTTTTATATATATAAATATATATATATATATTTATATATATATATATTCCCTTTCCTGTTTATATATCGCCTTTACCATTCTCATGTCCTGATATGTTAATGAGCCTTGGGATGCCGCTTCTCATTGGCCTGTGGCGTGGGAGTGGGCGGAGCCCCTTGAGCAAATACTGTCCTGATAAAGGTGTCTGGCGGCAAGCGCGCGGTGTGCGCAAGGTGATCACAGTGACGCTGAGGCGCGGTGCTGTTTTATTTAGTTTCGTGAAAGCCACTATCCTGGACACTGGTCCAACTGATACACCAGACATGGAGAGCGGTTCGGGGATTTTTCCGACAGGGAAGACGCTGCGGCAGGCGACTCTACTTCCCCCGATAATGGAGCTTCACAGGATCCAGGCGAAAGGGGCCCAGGGTGGATATCAGCTGATAGCCATGTATTACTCCTGGAATCAGCCATTTGGTTCTGAAGCAGTAGACCTTCTTGATCATCTGTGGCAAGTGGCTAATCACAGCAATGCATCAGTAACGCATGAAAGTCAAAGATGTCCAGTCCTGCATGTAGGCCAGTACTCCACCCTCTCTATCCCACTACAGCAGGTGTTTGGACACAGGTTTGGTGATGAGTTCAGTTTGCTGTTGCATCTGCGTAGCTCCCAGTCTGAAGACCGCAGTGTGCTGACCTTCCTCTGTCCAGACGGACACATTCTCCTGCAGATCCGCATCAGTGCCTACACCTTCACCTTCATCAGCACCCAACAACGACACTACGAGTTCCCCGTGGCAGTGCTGTCCGATGGAGGATGGCACCGTGTGGCCGTCAGTGTCTCCTCGGGACGGTTGGCCTTGTATGTGGATTGCTCCATGGTTGAGAGCGTGGACTGGGCCTATAAGGACGGTTTGGGAATATCCACCGATGGCCTGGTTATGGTGGGAGGAATCATTGAGGGGTTTGAGACCCCTTTTGAGGGTGATCTGATGCAGGTGGCATTTTTGATGGGAGAACCAGATGCAGCTCGAGATCAGTGTGCTGTTTTCCAATCCCAGTGTGGCGGAACCGGACACAAACCTCCTCGCTCTCCTCGCATACACACTGTAGAGGAACTTTTGCTGTCCTCAAATGACCTGGAAGACTTATTAGTGTCAGCAAAGGACAATGACTCTATTCGTGCAAAACTGACTTTTCGGTCTCTCTTGTGGCATAACCTCTTGACTATGAACGTTTTGTTGTGGTGTTTCGCTTTGATGCCACTGCCATTTTTGGTTTGCCAGTTTCCTGGATGGATTAATGGGAAACTTATGGTTTTCTTTGATCTCTTAAACCCAACAAGAGGTCAGAGGTCAAAGGCGTCTATATCACGCCTGCTCTCCTCCTGTGTCTCTATCCTCGGGCAGTCACAGACCTCAACTCCACTGGCTGTAATTATCAGTTCTGAGACAGTAATTTAGTACCGTCCATCCCCAAACCCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11069210_11101466.mRNA True 2290 mRNA 0.44 10 11068275 11101489

Neighbor

gene id symbol gene type direction distance location
CI01000006_10921053_11064211 NA coding upstream 4064 10921053 ~ 11064211 (+)
CI01000006_10911878_10918372 NA coding upstream 149296 10911576 ~ 10918979 (+)
CI01000006_10901059_10906327 EHMT1, EHMT1B coding upstream 161708 10901059 ~ 10906567 (+)
CI01000006_10856614_10870840 ARRDC1B, ARRDC1 coding upstream 196993 10856289 ~ 10871282 (+)
CI01000006_10837154_10838610 NA coding upstream 228992 10836572 ~ 10839283 (+)
CI01000006_11122190_11137711 NA coding downstream 20701 11122190 ~ 11137756 (+)
CI01000006_11143743_11157316 MAN1B1A coding downstream 42254 11143743 ~ 11158587 (+)
CI01000006_11178091_11284993 DFNB31, DFNB31A, WHRN coding downstream 75647 11177136 ~ 11285031 (+)
CI01000006_11298514_11313005 NA coding downstream 196883 11298372 ~ 11313385 (+)
CI01000006_11362605_11384441 NA coding downstream 261116 11362605 ~ 11385087 (+)
G47252 NA non-coding upstream 242342 10825660 ~ 10825933 (+)
G47175 NA non-coding upstream 263222 10801586 ~ 10805053 (+)
G47213 NA non-coding upstream 395683 10664966 ~ 10672592 (+)
G47220 NA non-coding upstream 452257 10615325 ~ 10616018 (+)
G47218 NA non-coding upstream 500976 10566654 ~ 10567299 (+)
G47194 NA non-coding downstream 3172 11104661 ~ 11185170 (+)
G47184 NA non-coding downstream 185997 11287486 ~ 11290495 (+)
G47164 NA non-coding downstream 213034 11314523 ~ 11321670 (+)
G47163 NA non-coding downstream 285714 11387203 ~ 11392950 (+)
G47298 NA non-coding downstream 313267 11414756 ~ 11415179 (+)
G47145 NA other upstream 556469 10485358 ~ 10511806 (+)
G46652 NA other upstream 909024 10156579 ~ 10159251 (+)
G45416 NA other upstream 2233578 8818814 ~ 8834697 (+)
G45355 NA other upstream 2855887 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 2868130 8197881 ~ 8200145 (+)
G47159 NA other downstream 314740 11416229 ~ 11521703 (+)
G47318 NA other downstream 522778 11624267 ~ 11638252 (+)
G48094 NA other downstream 1176131 12277620 ~ 12279541 (+)
G48081 NA other downstream 1275517 12377006 ~ 12384827 (+)

Expression


Co-expression Network