CI01000006_11388077_11391485


Basic Information

Item Value
gene id CI01000006_11388077_11391485
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11387494 ~ 11391485 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_11388077_11391485.mRNA
ATGCACTTTGAGGGATCCAGCAACGTCACGCTGTTGTTTAATTTCTGGGATGTGCGTGGGCCTGCAGGGATGGTCCTGTCGGTCTTTGTAGTTCTACTGCTCACGATGCTCTACGAGCTTCTGAAAGTGTGGAAGATCACTGTGGGAAAACAGAAGCACTCCTCCGTTACACATCCATCCGCTCCAGTGTCATTCTCTCCTGAACAGTCGTGTTTCGCCCCTGTCATGAGGTGTCAAGAGGGAAGCTCTGCTCTGGCCAGCAGCCCCTCCGAGATCTCATTAGCTCCCACAGAGACTACTACGGCCACTGCTGACACCACCGCCTCTCCTAAGAAGAGCTGGCTTCTGCACTGCCTCCAGACCGCCATACACATCCTGCAGGTGACGCTAGGCTACATGCTAATGCTTTGCGTCATGTCCTACAACGTGTGGATCTTCCTGGGGGTCATCATGGGATCCGTCTTGGGCTACTTTTTGGCTTTTCCTCTCCTGAATCATATTTGAGAAGAGATGAAGGAATGGAAAACATTCATTTTAATTCACTAAGGATTCTAGATGAAGAGCAATGGGAAACCAAGGATTGGAAAATGCCAGGATTGTGTGCCCATGATCAGAGTTGTGCATTTTCAACGATAAGACGTGCAAGAAATGTAGATTGAACAAGGATGATTTTCTTTTTTTAAGGTTGGATTTTTAAGATCATGCATGATATCTTATTTAACTTCAGTCTGGTGATAACCAATTGTAAAATTGGTTAAAAATCATATTGTTAAAGTGTTTTAGAGGTTACATTTTAAACCTCATTGGAAACACAATATCTTATGCTAAGAACGGTGTTAAATGCATGTGATTTTTATATTTTACATGGTCGTGACCTTCGGTTCGAACAGTTCCTTTGAGAACGGTGATGTGCCTCTGACTGGTTTTAAACTTTCTACAATTACTGATGTAATTAATAAGCTAATTTTCTGTTACACAAATGAATGTTTAAATTCTGCTCTGTGAGATTTGCTTTAATGTAGCTGGTGGTTTTCTGTTATTTTGGGAAATCACACTAGTTTTAACCCTTGTGATGAGTCTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_11388077_11391485.mRNA True 1087 mRNA 0.42 3 11387494 11391485

Neighbor

gene id symbol gene type direction distance location
CI01000006_11320839_11338355 STXBP1, STXBP1A coding downstream 49139 11320462 ~ 11338355 (-)
CI01000006_10676705_10699710 NA coding downstream 687612 10676367 ~ 10699882 (-)
CI01000006_10499329_10508831 NA coding downstream 877839 10499240 ~ 10509655 (-)
CI01000006_10453630_10483241 NA coding downstream 903488 10453613 ~ 10484006 (-)
CI01000006_10402704_10447782 NA coding downstream 938393 10402695 ~ 10449101 (-)
CI01000006_11459706_11462546 NA coding upstream 67803 11459288 ~ 11462605 (-)
CI01000006_11530728_11535297 NA coding upstream 138881 11530366 ~ 11535900 (-)
CI01000006_11596063_11609407 NA coding upstream 204154 11595639 ~ 11609407 (-)
CI01000006_11627878_11631177 NA coding upstream 235709 11627194 ~ 11631177 (-)
CI01000006_11636228_11638176 CAMKK2 coding upstream 244743 11636228 ~ 11638176 (-)
G47758 NA non-coding downstream 95013 11287635 ~ 11292481 (-)
G47681 NA non-coding downstream 271983 11111614 ~ 11115511 (-)
G47673 NA non-coding downstream 318446 11063673 ~ 11069048 (-)
G47668 NA non-coding downstream 331913 11054903 ~ 11055581 (-)
G47654 NA non-coding downstream 368285 11017763 ~ 11019209 (-)
G47806 NA non-coding upstream 87621 11479106 ~ 11482501 (-)
G47812 NA non-coding upstream 112093 11503578 ~ 11504962 (-)
G47853 NA non-coding upstream 248944 11640429 ~ 11641264 (-)
G47854 NA non-coding upstream 254042 11645527 ~ 11648165 (-)
G47705 NA non-coding upstream 313442 11704927 ~ 11708257 (-)
G47658 NA other downstream 354367 11030911 ~ 11033127 (-)
CI01000006_07500281_07507754 NA other downstream 3876538 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 4410622 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 6825426 4559509 ~ 4562068 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 258878 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 942924 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 959274 12569205 ~ 12582487 (-)

Expression


Co-expression Network